CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.492e-79 Identity = 149/158 (94.30%), Postives = 155/158 (98.10%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 MA++GNKNINAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV+AEEA+ YAQEN LFFMETSAKTAT Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTAT 158
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.767e-72 Identity = 136/157 (86.62%), Postives = 147/157 (93.63%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 MA++ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMALAGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA Sbjct: 1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTA 157
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 3.332e-71 Identity = 134/158 (84.81%), Postives = 146/158 (92.41%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 MA+ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ S RAKKWVQELQ QGNPNMVMALAGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTAT Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTAT 158
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKADL + R V +EAQ+YA +N L FMETSAKT+ Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.225e-58 Identity = 112/153 (73.20%), Postives = 127/153 (83.01%), Query Frame = 3 Query: 84 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R V +EAQAYA++N L FMETSAKTA Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTA 168 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |