CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.727e-30 Identity = 64/147 (43.54%), Postives = 95/147 (64.63%), Query Frame = 3 Query: 96 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 + AK+VLLG+ GK+SLVLR+ + +F + E T+ A+F + L + ++ IWDTAGQERYH+L P+YYR + AIIVYDIT++ SF +A+ W++EL+ + + + GNK DL R V+ ++A YA+ G TSAK Sbjct: 15 VKAKVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAK 161
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 3.727e-30 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 KL+L+GD G GKS L+LRF + E STIG F +T+ +N T+K +IWDTAGQER+ ++ YYRGA I+VYD+T++ +FE ++W+QE+ N+ L GNK+DL+ + V A+A+A + F+ETSAK +T Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQST 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 4.867e-30 Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 KL+L+GD G GKS L+LRF + E STIG F +T + TVK +IWDTAGQER+ ++ YYRGA IIVYD+T+Q SF K+W+QE+ + L GNK+D++D + V A+ +A + F+ETSAK +T Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDST 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.867e-30 Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K ++ G GKSSL+L+F + +F ++TIG F ++++ ++ + +K EIWDTAGQE + S+ YYRGA A++ YDIT + SF+ W+ E++ +PN+V+AL GNK D D R +T EE A+EN + F ETSAK Sbjct: 7 KCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAK 150
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.867e-30 Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+L+GD GKS L+LRF +I+ STIG F +T+ + T+K +IWDTAGQER+ ++ YYRGA IIVYD T SF K+W+ E+ N ++ L GNK D+++++ V+ E +A A E G+ F+ETSAK Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAK 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 60/144 (41.67%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K+VL+G+ G GK+ LV RF +G F Q +TIG F +T+ +N VK +IWDTAGQER+ S+ YYR A A I+ YDIT + SF +W++E++ + ++ L GNK DL + R+V+ + A+ +++ ++++ETSAK Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 60/144 (41.67%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K+VL+G+ G GK+ LV RF +G F Q +TIG F +T+ +N VK +IWDTAGQER+ S+ YYR A A I+ YDIT + SF +W++E++ + ++ L GNK DL + R+V+ + A+ +++ ++++ETSAK Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 60/144 (41.67%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K+VL+G+ G GK+ LV RF +G F Q +TIG F +T+ +N VK +IWDTAGQER+ S+ YYR A A I+ YDIT + SF +W++E++ + ++ L GNK DL + R+V+ + A+ +++ ++++ETSAK Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.302e-30 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ TVK +IWDTAGQER+ ++ YYRGA +VYD+T+ SF K+W+QE+ + L GNK+D+ D + V A+ +A G+ F+ETSAK A+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNAS 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.302e-30 Identity = 64/145 (44.14%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 K++L+GD GK+ +V RF G F Q++TIG F + + +N VK ++WDTAGQER+ ++ YYR A AII YDIT + SFE W+ E + G N++M L GNK+DL + R++ EEA A+++GL +ETSAK Sbjct: 17 KIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAK 161 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |