CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.084e-29 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 K++L+GD GK+ +V RF G F++ Q++TIG F ++L +N VK ++WDTAGQER+ ++ YYR A AII YDIT + SFE W+ E G N+++ L GNK+DL + R++ EEA A+++GL +ETSAK Sbjct: 17 KIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAK 161
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.084e-29 Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 KL+L+GD G GK+ L++RF + F STIG F +T+ + +K ++WDTAGQER+ ++ YYRGA I+VYDIT++ SFE + W++ ++ + + L GNK D+ RKV E+A A+E+G+ F ETSAK++ Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSS 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 64/146 (43.84%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GK+ ++ R+ + +F + TIGA F S+ ++V+ VK +IWDTAGQER+ S+A YY A ++VYDITN+ SF ++W+ + + P +V+ L GNK DL D +VT EA +AQENGL F+ETSA T Sbjct: 11 KFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALT 156
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 64/145 (44.14%), Postives = 96/145 (66.21%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GKS L+ +F++ +F + TIG F S+ ++V + VK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + + N+V+ L GNK DL R+VT EA +AQEN L F+ETSA T Sbjct: 10 KFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_HUMAN (Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 64/154 (41.56%), Postives = 98/154 (63.64%), Query Frame = 3 Query: 75 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 A + + K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYDIT++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK Sbjct: 11 AAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 164
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 64/155 (41.29%), Postives = 101/155 (65.16%), Query Frame = 3 Query: 81 TGNKNINA--KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 T ++N++ K++L+GD GK+ +V F G + E Q++TIG F ++L ++ VK ++WDTAGQER+ ++ YYR A AAII YD+T +++FE W+ E++ G N+V+ L GNK+DL + R V E+A A+++GL +ETSAK Sbjct: 9 TSDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSAK 163
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 KL+L+GD G GK+ L++RF + F STIG F +T+ + +K ++WDTAGQER+ ++ YYRGA I+VYDIT++ SFE + W++ ++ + + L GNK D+ RKV E+A A+E+G+ F ETSAK++ Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSS 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 KL+L+GD G GK+ L++RF + F STIG F +T+ + +K ++WDTAGQER+ ++ YYRGA I+VYDIT++ SFE + W++ ++ + + L GNK D+ RKV E+A A+E+G+ F ETSAK++ Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSS 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 63/146 (43.15%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKT 539 KL+L+GD G GKS L+LRF G F +TIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA ++VYD+T+++SF + W++ ++ + N+ L GNKAD+ ++ R V + QA A E G+ F ETSAKT Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKT 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + + N+V+ L GNK DL R+VT EA +AQEN L F+ETSA T Sbjct: 10 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALT 154 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |