CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB39A_MOUSE (Ras-related protein Rab-39A OS=Mus musculus GN=Rab39 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 61/153 (39.87%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQ----ESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 +L+++GD GKS L+ RF +G+F + T+G FFS+ L + +K ++WDTAGQER+ S+ YYR + +V+DITN+ SFE K W++E + P +V L G+K DL R+V+ EEA+ + + G+ ++ETSAK AT Sbjct: 10 RLIVIGDSTVGKSCLLHRFTQGRFPGLHSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVSREEAERLSTDCGMKYIETSAKDAT 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++GD G GKSSL+LRF F +TIG F +T+ +N VK +IWDTAGQER+ ++ YYRG I+VYD+T+ SF K+W+ E+ Q ++ L GNK D + + V E+A +A + G+ ETSAK Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-QNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAK 152
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++GD G GKSSL+LRF F +TIG F +T+ +N VK +IWDTAGQER+ ++ YYRG I+VYD+T+ SF K+W+ E+ Q ++ L GNK D + + V E+A +A + G+ ETSAK Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-QNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAK 152
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++GD G GKSSL+LRF F +TIG F +T+ +N VK +IWDTAGQER+ ++ YYRG I+VYD+T+ SF K+W+ E+ Q ++ L GNK D + + V E+A +A + G+ ETSAK Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-QNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAK 152
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 +L+L+GD G GK+ L+ RF +F STIG F +T+ V+ V+ +IWDTAGQERY ++ YYR A +VYDI+++ S++ KWV ++ + L GNKAD R+V E+ Q A+E G+ F ETSA T Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 +L+L+GD G GK+ L+ RF +F STIG F +T+ V+ V+ +IWDTAGQERY ++ YYR A +VYDI+++ S++ KWV ++ + L GNKAD R+V E+ Q A+E G+ F ETSA T Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 +L+L+GD G GK+ L+ RF +F STIG F +T+ V+ V+ +IWDTAGQERY ++ YYR A +VYDI+++ S++ KWV ++ + L GNKAD R+V E+ Q A+E G+ F ETSA T Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++G+ GK+S + R+ F ST+G F +T+ +D VK +IWDTAGQERY ++ YYRGA I++YD+TN+ SF + WV +++ N + L GNK D+ D R ++ E + A + G+ F ETSAK Sbjct: 23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAK 166
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26 Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+L+G+ GK+S + R+ F ST+G F +T+ +D +K +IWDTAGQERY ++ YYRGA +++YDI NQ SF + W +++ N + L GNK DL D R V+AE+ Q A + G F E SAK Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 +L+L+GD G GK+ L+ RF +F STIG F +T+ V+ V+ +IWDTAGQERY ++ YYR A +VYDI+++ S++ KWV ++ + L GNKAD R+V E+ Q A+E G+ F ETSA T Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACT 154 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |