CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++G+ GK+S + R+ F ST+G F +T+ N+ +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R ++ E Q ++ G F ETSAK Sbjct: 32 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAK 175
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++G+ GK+S + R+ F ST+G F +T+ N+ +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R ++ E Q ++ G F ETSAK Sbjct: 32 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAK 175
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26 Identity = 58/145 (40.00%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KL+L+GD G GKS L+LRFV+ +F +TIG F +T+ +K ++WDTAGQER+ ++ YYRGA +++YD+T+ SFE + W Q + N + + L GNK D R+V+ E+ Q A + + F+E SAK+ Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKS 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+L+G+ GK+S + R+ F ST+G F +T+ +D +K +IWDTAGQERY ++ YYRGA +++YDI NQ SF + W +++ N + L GNK DL D R V AE+ + A + G F E SAK Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+L+G+ GK+S + R+ F ST+G F +T+ +D +K +IWDTAGQERY ++ YYRGA +++YDI NQ SF + W +++ N + L GNK DL D R V AE+ + A + G F E SAK Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |