CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRF F +TIG F +T++V+ K IWDTAGQER+ +L P YYRGA I+VYD+T + +F + W+ EL+ N +V L GNK D + R+V E +A+++ + F+E SAKT Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++G+ GK+S + R+ F ST+G F +T+ ND +K +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ D R V++E + A G F E SAK Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7_NEUCR (Probable Ras-related protein Rab7 OS=Neurospora crassa GN=17E5.300 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKV-TAEEAQAYAQENG-LFFMETSAKTA 542 + K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V ++WDTAGQER+ SL +YRGA ++VYD+ N SF+ W E Q +P N + GNK D+ ++++V + + A + Q G + + ETSAK A Sbjct: 2 SSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVLGNKIDMEESKRVISTKRAMTFCQSKGNIPYFETSAKEA 161
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL+ +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA++ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWSYSKNNIPYFETSAKEA 159 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |