CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 81 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYA-QENGLFFMETSAKTA 542 T K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDTAGQER+ SL +YRGA ++V+D+T +F+ W E Q +P N + GNK D L+ R+V + AQA+ +N + + ETSAK A Sbjct: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.764e-25 Identity = 64/162 (39.51%), Postives = 93/162 (57.41%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTA 542 MAT K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ L V+D V +IWDTAGQER+ SL +YRGA ++ YD+ +FE W E Q P N + GNK DL + R V+ + A ++ Q G + + ETSAK A Sbjct: 1 MAT--KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEA 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KL+++G+ GK+S + R+ F ST+G F +T+ D VK +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ R V+ + + A + GL F ETSAK Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 75 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 A+ N + KL+++G+ GK+S + R+ F ST+G F +T+ ++ VK +IWDTAGQERY ++ YYRGA I++YDITN+ SF + W +++ N + L GNK D+ + R V E+ Q A++ G F E SAK Sbjct: 14 ASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAK 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.714e-25 Identity = 58/152 (38.16%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 90 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP---NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K ++ KL+++G +G GK+SL+ ++V F E ++T+GA+ S+ + + D T+K +IWDT GQER+ S+ +Y+G+ I+ +D+T+ SFE W ++ A+ P + M L GNK DL D RKV E AQ + +E + + E SAK Sbjct: 5 KKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDLAD-RKVPQEVAQGWCREKDIPYFEVSAK 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24 Identity = 53/145 (36.55%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++L+GD GK+SL+LRF F E + + ++ + ++ T +IWDTAGQER+ ++ +YRGA ++ YD+T+Q ++ + W+QE+Q + L GNK DL D + V A+ YA G+ FME SA T Sbjct: 8 KILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAAT 152 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |