CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB33B_HUMAN (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH-SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++GD GK+ L RF G+F + E+TIG F + + ++ +K ++WDTAGQER+ S+ YYR A + VYD+TN ASF W++E + N + L GNK DL A +V + AQ +A + + ETSAK Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 180
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB33B_CHICK (Ras-related protein Rab-33B OS=Gallus gallus GN=RAB33B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH-SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++GD GK+ L RF G+F + E+TIG F + + ++ +K ++WDTAGQER+ S+ YYR A + VYD+TN ASF W++E + N + L GNK DL +A +V + AQ +A + + ETSAK Sbjct: 33 KIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTNDIPRILVGNKCDLRNAIQVPTDLAQKFADTHSMPLFETSAK 178
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 96 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL---DARKVTAEEAQAYAQENGLFFMETSAKT 539 I+ K+VLLG GK+ +V R+ GQF + +TIG AF S+ + V + V IWDTAG ERY ++ YYR A AAI+ YD+TN+ S+E+ W +EL Q P + + + G K DL+ D + V EE + A+ ETS++T Sbjct: 6 IDLKVVLLGYASVGKTCIVTRYTSGQFGD-THTTIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEEL-TQNEPEIEIYIVGTKLDLIQQGDIKAVPEEEVKQTARRYKAHIFETSSRT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.412e-23 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN-PNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++L+GD GK+S+V RF F E TIG F + + V+ V IWDTAGQE++ +L YYRGA I+ YD+T + SF+ W+ E++ N N+V L GNK D + R+VT EE +A++ + F+E SAK+ Sbjct: 8 KVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKID-KENREVTREEGAEFAKKKAMLFIECSAKS 152
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB33B_PONAB (Ras-related protein Rab-33B OS=Pongo abelii GN=RAB33B PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23 Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH-SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE----LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++GD GK+ L RF G+F + E+TIG F + + ++ +K ++WDTAGQER+ S+ YYR A + VYD+TN ASF W++E L A P + L GNK DL A +V + AQ +A + + ETSAK Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLASDIPRI---LVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 180
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23 Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH-SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++++GD GK+ L RF G+F + E+TIG F + + ++ +K ++WDTAGQER+ S+ YYR A + VYD+TN ASF W++E + N + L GNK DL A +V + AQ +A + + ETSAK Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 180
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RASEF_CAEEL (RAS and EF-hand domain-containing protein homolog OS=Caenorhabditis elegans GN=tag-312 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR--KVTAEEAQAYAQENGLFFMETSA 533 ++V+ GD GKSS V+R ++ QF ST+G F +T+ V+ V ++WDTAGQER+ SL Y+R A AI+VYD+ + SF R + W++ ++ ++ + L GNK D+ + V + + A G+ FMETSA Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTDGASMAAAMGVLFMETSA 607
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 58/152 (38.16%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL----QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTAT 545 K++LLGD G GKSSL+ R+V +F TIG F ++ L V+ V +IWDTAGQER+ SL +YRG+ ++ + + + SF+ W +E + + + GNK D+ + R+V+ EEAQA+ ++NG + + ETSAK +T Sbjct: 9 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDST 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 58/152 (38.16%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL----QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTAT 545 K++LLGD G GKSSL+ R+V +F TIG F ++ L V+ V +IWDTAGQER+ SL +YRG+ ++ + + + SF+ W +E + + + GNK D+ + R+V+ EEAQA+ ++NG + + ETSAK +T Sbjct: 9 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDST 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 59/152 (38.82%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL----QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTAT 545 K++LLGD G GKSSL+ R+V +F TIG F ++ L V+ V +IWDTAGQER+ SL +YRG+ ++ + + + SF+ W +E + + + GNK D+ + R+V+ EEAQA+ ++NG + + ETSAK AT Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDAT 159 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |