CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K VL GD G GK+S++ R F E TIG F +T+ + +K +IWDTAG++R+ + +YRG IIVYD+T+Q SFE W+++++ N N++ + GNK DL+ + V AQ +A + F E SAK Sbjct: 10 KFVLAGDSGVGKTSILFRITDDTFTE-THITIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAK 151
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RASEF_MOUSE (RAS and EF-hand domain-containing protein homolog OS=Mus musculus GN=Rasef PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.322e-22 Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA------RKVTAEEAQAYAQENGLFFMETSAK 536 K+VL GD GKSS ++R K +F +T+G F +TL V+ ++WDTAGQER+ S+A Y+R A +++YD+T + SF ++WV ++ + + + L GNKADL D + ++A + A G F ETSAK Sbjct: 430 KIVLAGDAAVGKSSFLMRLCKNEFQGNTSATLGVDFQMKTLIVDGEQTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNVREWVDMVEDGTHRTIPIMLVGNKADLRDVDNAENQKCISAYLGEKLAMTYGALFCETSAK 579
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 84 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN----DATV------KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 G+ + K + LGD G GK+S++ ++ G+F +T+G F + + D TV ++WDTAGQER+ SL ++R A ++++D+TN+ SF + W+ +LQ NP++V L GNK+DL D R V EEA+ A++ G+ + ETSA T Sbjct: 4 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIV--LCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGT 168
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 55/151 (36.42%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP----NMVMALAGNKADL--LDARKVTAEEAQAY-AQENGLFFMETSAK 536 K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + +D +IWDTAGQER+ SL +YRGA ++V+D+ SF+ W +E Q +P N + GNK D+ ++R V+ ++A+A+ A + + + ETSAK Sbjct: 10 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAK 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 T G+ + KL+ LGD G GK++ + R+ +F +T+G F + + N V ++WDTAGQER+ SL ++R A ++++D+T+Q SF + W+ +LQA NP++V L GNKADL D R+V +A+ A + G+ + ETSA T Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAAT 166
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 T G+ + KL+ LGD G GK++ + R+ +F +T+G F + +A N V ++WDTAGQER+ SL ++R A ++++D+T+Q SF + W+ +LQA NP++V L GNKADL D R+V +A+ A++ + + ETSA T Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARDLAEKYSIPYFETSAAT 166
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB44_MOUSE (Ras-related protein Rab-44 OS=Mus musculus GN=Rab44 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.854e-21 Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 108 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSA 533 +V LGD GK+S + F +T+G F + L V++ T ++WDTAGQERYHSL R A +++YD+T+Q SF + W+ LQ G + M L GNK D + R+V E + AQE G+ F E SA Sbjct: 540 VVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCEEERQVPTEAGRRLAQELGVSFGECSA 681
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21 Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 T G+ + KL+ LGD G GK++ + R+ +F +T+G F + + + V ++WDTAGQER+ SL ++R A ++++D+T+Q SF + W+ +LQA NP++V L GNKADL D R+V +A+ A++ G+ + ETSA T Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARELAEKYGIPYFETSAAT 166
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB27A_HUMAN (Ras-related protein Rab-27A OS=Homo sapiens GN=RAB27A PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21 Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 84 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 G+ + K + LGD G GK+S++ ++ G+F +T+G F + + + + ++WDTAGQER+ SL ++R A ++++D+TN+ SF + W+ +LQ NP++V L GNK+DL D R V EEA A A++ G+ + ETSA T Sbjct: 4 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIV--LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGT 168
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB44_HUMAN (Ras-related protein Rab-44 OS=Homo sapiens GN=RAB44 PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21 Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 69 PMATTG---NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSA 533 PMA G N + ++ LGD GK+S + + F +T+G F +TL V++ ++WDTAGQE YHS+ R A +++YDIT+Q SF + W+ LQ G+ +V+ L GNK D + R+V+ E Q AQE G++F E SA Sbjct: 522 PMAGGGPQANPDYLFHVIFLGDSNVGKTSFLHLLHQNSFATGLTATVGVDFRVKTLLVDNKCFVLQLWDTAGQE-YHSMTRQLLRKADGVVLMYDITSQESFAHVRYWLDCLQDAGSDGVVILLLGNKMDCEEERQVSVEAGQQLAQELGVYFGECSA 678 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |