CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20 Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKS 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN_CANFA (GTP-binding nuclear protein Ran OS=Canis familiaris GN=RAN PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20 Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKS 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAN_BOVIN (GTP-binding nuclear protein Ran OS=Bos taurus GN=RAN PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20 Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKS 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB34_RAT (Ras-related protein Rab-34 OS=Rattus norvegicus GN=Rab34 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 3 Query: 63 EHPMATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQA--YAQENGLFFMETSAKT 539 EH T G K +K++++GD+ GK+ L+ RF K F + ++TIG F + V ++WDTAGQER+ +A YYRGA A IIV+++ + AS E +K+W+ + + +P N+++ L G+K DL + + E A AQE + S+ T Sbjct: 42 EHRTGTVGFKI--SKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHSKQWLADALKENDPSNVLLFLVGSKKDLSTPAQYSLMEKDALKVAQEIKAEYWSVSSLT 201
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20 Identity = 55/158 (34.81%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 84 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 G+++ K++++GD GK+SLV R+ + F + +ST+G F + L +D V+ ++WD AGQER+ S+ +YYR A+A +I++D+TN +F +++W Q+L ++ G P + LA NK D L V+ ++ +++ENG + ETS K Sbjct: 2 GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLA-NKCD-LSPWAVSRDQIDRFSKENGFTGWTETSVK 157
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB7L_HUMAN (Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20 Identity = 55/158 (34.81%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 84 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 G+++ K++++GD GK+SLV R+ + F + +ST+G F + L +D V+ ++WD AGQER+ S+ +YYR A+A +I++D+TN +F +++W Q+L ++ G P + LA NK D L V+ ++ +++ENG + ETS K Sbjct: 2 GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLA-NKCD-LSPWAVSRDQIDRFSKENGFTGWTETSVK 157
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAP2C_MOUSE (Ras-related protein Rap-2c OS=Mus musculus GN=Rap2c PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKS 149
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAP2C_HUMAN (Ras-related protein Rap-2c OS=Homo sapiens GN=RAP2C PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKS 149
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAP2C_BOVIN (Ras-related protein Rap-2c OS=Bos taurus GN=RAP2C PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKS 149
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB34_MOUSE (Ras-related protein Rab-34 OS=Mus musculus GN=Rab34 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 63 EHPMATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQA 491 EH T G K +K++++GD+ GK+ L+ RF K F + ++TIG F + V ++WDTAGQER+ +A YYRGA A IIV+++ + AS E K+W+ + + +P N+++ L G+K DL + + E A Sbjct: 42 EHRTGTVGFKI--SKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLTDALKENDPSNVLLFLVGSKKDLSTPAQYSLMEKDA 183 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |