CX293832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.815e-18 Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 + +GH EA+ PD R L E + T +FVF G G+ M + T G+ +ISGGHVNPAVT VGG+++L R LY AQ+L S+ AC LL+++T G T AL+ G Sbjct: 4 LTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEG 135
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.073e-17 Identity = 51/119 (42.86%), Postives = 61/119 (51.26%), Query Frame = 3 Query: 147 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFAL 503 P A RAAL+EF++T +FVFA EGS K+ + T N SGGHVNPAVTFG VG IS R LYW AQLLG+ +A LLL+ + G F L Sbjct: 25 PGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTL 142
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 2.390e-17 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 147 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ 482 P ALRA AEF ST +FVF GS ++ LT + + S ++SGGHVNPAVTF +GG+I++ I YW +Q+LGST ACL+L +++ GQ Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQ 125
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.815e-15 Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 135 EATHPDA--LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 EA PD +RA LAE + T +FVF G + MA G P + ++SGGH+NPAVT G V G+I+ LR +LY AQLL S++AC+LL++++ G T AL +G Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAG 144
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.894e-14 Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 156 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 +RA LAE + T +FVF G + MA G P + ++SGGH+NPAVT G V G+I+ LR +LY AQLL S+ AC+LL+F++ G T AL G Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRG 142
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14 Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 3 Query: 150 DALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS 506 +ALR ++EFIST FV A GS M+ KL + P N+SGGHVNPAVTF V G IS+ + YW +Q++ S +ACL+LK Q + ++ Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIA 138
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 99 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTH-NGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ 482 M N+ V R + P +LR+ LAEFIST +FVF GS ++ LT + ++ ++SGGHVNPAVTF +GG I + + YW +QLLG+T ACL L + G+ Sbjct: 1 MASNNLLVDLKRCFSAP-SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGE 128
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 45/127 (35.43%), Postives = 61/127 (48.03%), Query Frame = 3 Query: 135 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 E +RA LAE + T +FVF G + MA GA P + ++SGGH+NPAVT G+I+ R LY AQLL S++AC+LL+++T G T L SG Sbjct: 12 EVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSG 138 The following BLAST results are available for this feature:
BLAST of CX293832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293832 ID=CX293832; Name=CX293832; organism=Citrus clementina; type=EST; length=514bpback to top |