CX293832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.680e-27 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 +A G ++ +++A +AEFI+TL+FVFAG GS +AF +LT+ GA P+ N SGGH+NPAVTFG VGG+I++L G+ YW+AQLLG++VACLLL+FVT+G+ +S G Sbjct: 4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.680e-27 Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS 506 +A G ++ +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA P+ NISGGH+NPAVTFG VGG+I++L G+ YW+AQLLG+TVACLLL FVT+G+ A++ Sbjct: 4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAVA 134
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.157e-26 Identity = 62/133 (46.62%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 I +G ++ +L+A L+EFI+TL+FVFAG GS +AF KLT + A P+ NISGGH+NPAVT G VGGNI+++ G YWIAQ LGS VACLLL FVTNG++ +++G Sbjct: 4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.157e-26 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ 482 +A G ++ +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA P+ NISGGH+NPAVTFG VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+ Sbjct: 4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGK 126
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 8.195e-26 Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 153 ALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 +LRA LAEFISTL+FVFAG GS +A+ KLT + A NISGGHVNPAVTFG VGG I+++ G+ YWIAQLLGST AC LLK+VT G ++++G Sbjct: 17 SLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.493e-23 Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 105 IRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 ++ I +GH EA PD ++A + EFI+T +FVFAG GS MA + L N +ISGGH+NPAVT G +GG+IS+ R LYWI QLL S+ AC LL ++T G T L+SG Sbjct: 1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASG 132
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.493e-23 Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 3 Query: 111 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS 506 NIA G ++ +L+A +AEFISTL+FVFAG GS +A+ KLT P+ NISGGHVNPAVTFG +GG I++L G+ YWIAQLLG+ V +L++F T G T LS Sbjct: 4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS 134
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.653e-21 Identity = 56/123 (45.53%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ 482 +A+GH REAT P LRA +AE + T +FVF+G GS MA KL G +T ++SGGH+NPAVT G GG+I+L R LY AQLLGS++ACLLL +T G+ Sbjct: 4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGE 125
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.768e-20 Identity = 55/118 (46.61%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 117 AVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFV 470 A+GH REA+ +RA LAE I T +FVFAG GS MA KL G +T ++SGGH+NPAVT G G I+L R LY AQLLGST+ACLLL F+ Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFL 122
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.655e-18 Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 96 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 ++P+ + +GH EA P LRA E + T +FVF G S + K GA + ++SGGH+NPAVT VGG+I+L R LY AQL GS++ACLLL+ +T G T AL+ G Sbjct: 3 LLPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADG 140 The following BLAST results are available for this feature:
BLAST of CX293832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293832 ID=CX293832; Name=CX293832; organism=Citrus clementina; type=EST; length=514bpback to top |