CX293832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.960e-31 Identity = 69/140 (49.29%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 108 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 R G EATHPD++RA LAEF+ST +FVFA EGS ++ +KL H G NTP N+SGGHVNPAVTFGA VGG ++ +R I YWIAQLLG+ +ACLLL+ TNG F L+SG Sbjct: 7 RAYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASG 146
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30 Identity = 67/139 (48.20%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 96 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 + P R VG +ATHPD +RAA++EFI+T IFVFA EGS ++ K+ H+ +T NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+ A LLL+ T G FAL+SG Sbjct: 5 VRPGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASG 142
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.484e-30 Identity = 67/138 (48.55%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 99 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 M R + G EATHPD++RA+LAEF ST IFVFAGEGSG+A K+ + A + ++SGGHVNPAV+FGA +GG IS++R + YWIAQLLGS VA L+L+ VTN S F +S G Sbjct: 1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPG 138
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.084e-29 Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 102 PIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 P R VG +ATHPD +RAA++EF++T IFVFA EGS ++ KL + +TP NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+ T G FAL+SG Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKL-YQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASG 143
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.919e-29 Identity = 65/137 (47.45%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 108 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGA--NTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 R VG +ATHPD +RAA++EFI+T IFVFA EGS ++ K+ H+ + +T N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+ A LLL+ T G FAL+SG Sbjct: 11 RRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASG 147
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28 Identity = 66/133 (49.62%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 IA G ++ +L+A +AEFI+TL+FVFAG GS +A+NKLT + A P+ NISGGH+NPAVT G VGGNI++L G YWIAQLLGSTVACLLLK+VTNG +++G Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.304e-28 Identity = 66/133 (49.62%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 IA G ++ +L+A +AEFI+TL+FVFAG GS +A+NKLT + A P+ NISGGH+NPAVT G VGGNI++L G YWIAQLLGSTVACLLLK+VTNG +++G Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 IA G ++ +++A +AEFI+TL+FVFAG GS +A+NKLT + A P+ N+SGGH+NPAVT G VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG + +++G Sbjct: 4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.755e-28 Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSG 512 I VG ++ +L+A L+EFI+TL+FVFAG GS +AF KLT +GA P+ NISGGH+NPAVT G +GGNI+L+ G YWIAQ LGS VACLLL FVTNG++ +S+G Sbjct: 4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAG 136
BLAST of CX293832 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27 Identity = 62/131 (47.33%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 114 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS 506 +A G R++ +L+A +AEFI+TL+FVFAG GS +A+++LT GA P+ NISGGH+NPAVTFG VGG+I++L GILYW+AQLLG++VAC LL++VT+GQ +S Sbjct: 4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVS 134 The following BLAST results are available for this feature:
BLAST of CX293832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293832 ID=CX293832; Name=CX293832; organism=Citrus clementina; type=EST; length=514bpback to top |