CX293839

Overview
NameCX293839
Unique NameCX293839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 47/147 (31.97%), Postives = 74/147 (50.34%), Query Frame = 3 
Query:   87 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTAS 509
            +K LEGKV                 F    AKVV+      D  + + E+   K+G +   +  D++ E +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S
Sbjct:    2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 146
The following BLAST results are available for this feature:
BLAST of CX293839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
DHGB_BACME7.972e-1131.97Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionC05001D06SK FlavSen1 Citrus clementina cDNA clone C05001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293839 ID=CX293839; Name=CX293839; organism=Citrus clementina; type=EST; length=593bp
AGTTTCTTGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTT
GAAGAAAAGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGA
AGGCAAAGTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGG
CGGTTGAACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTC
CAGGATAAGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTG
CTACATCCATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTG
ATACCGCCGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCA
GGAATTCTTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGA
TCTAGAACGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCA
AGCATGCTGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTT
ACAGCTAGTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATAC
AATATCCAAATATGGGATTTTAGGACTAGTAAAGTGCTTGTCA
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