CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 N RQVTF KRR GL KKA ELS+LCDAEV L+VFS+ G+L+++A+ S+ IDRY Sbjct: 32 NLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRY 88
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13 Identity = 32/59 (54.24%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKK 420 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHK 71
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13 Identity = 32/59 (54.24%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKK 420 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHK 71
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYK 417 N+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ Sbjct: 13 NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKA 423 N+TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I++Y+ A Sbjct: 13 NSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHA 74
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEA 489 N T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS+G+L+EY + +S+ I RY + S + + Q Y + A Sbjct: 16 NKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL---PVEDNRVQLYDEVA 96
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKA 423 N TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEY++ R DRY KA Sbjct: 13 NPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKA 74
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13 Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VRATIDRYKKACADS 435 N TNRQVT+ KRR G++KKA EL+VLCDA+VA+I+FSS G+ +E+ + S ++ DRY++A S Sbjct: 13 NATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTS 78
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.578e-13 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 256 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 RQVTF KRR GL KKA ELSVLCDA+VALIVFSS G+L +A++S+ ID+Y Sbjct: 17 RQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12 Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYK 417 N TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I+ Y+ Sbjct: 13 NATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ 72 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |