CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12 Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKA 423 N TNRQVT+ KRRNGL KKA+ELSVLCDA+V++I+ SS +L+EY + + + D+Y+KA Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKA 74
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYK 417 N TNRQVT+ KRRNGL KKA+EL+VLCDA V++I+FSS +L+EY N + + +D Y+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 N NRQ TF KR+NGL+KKA ELS+LCD E+A+IVFSS +L++Y++ + + RY Sbjct: 15 NERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRY 71
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S RL++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 256 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 RQVTF KRR GL KKA EL+VLCDA+VAL+VFSS G+L ++A++++ ID+Y Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ G++KKAYELSVLCD E+ALI+FSS +LY+YA+ + + +Y Sbjct: 16 NRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MEF2C_HUMAN (Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |