CX293843

Overview
NameCX293843
Unique NameCX293843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length537
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.211e-19
Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK--PESSAMVQDD----------------EXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P SDTY++FGEAK+ED+S     +AA++          V +    +SSA                        DE+ V   DI+LV++Q G  R +AV+AL
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEAL 181          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_PICGU (Nascent polypeptide-associated complex subunit alpha OS=Pichia guilliermondii GN=EGD2 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.888e-19
Identity = 52/133 (39.10%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQ----------------FKVPPPNTGNVASKPESSAMVQDDE-XVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KL +KP+PG++RVT K+  N+++ I +PDVFKS  + TY+VFGEAK++D++ ++    A+Q                 K P   T ++ +       V++DE  VDETG++ KDIE+++ Q  V R++AVKAL
Sbjct:   32 KLHLKPVPGITRVTFKQKGNLIYAIEQPDVFKS-AAGTYVVFGEAKVDDMNKRIAEAQAQQEQQEALTKAAADAETADKSPESITNDLQNASLEDKTVEEDEGEVDETGLDSKDIEIIVEQTQVSRAKAVKAL 163          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.888e-19
Identity = 60/138 (43.48%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  182 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-SAMVQ----------------DDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS   + ++VFGEAK++D + +L   Q    +   V P     V+  P+S  A +Q                DD  VDETG+   DIELVM QAGVPR++A KAL
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKSQGGN-FVVFGEAKVDDFTQRLAKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAKAAKAL 160          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.447e-18
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-------SAMVQDDE--XVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            K  MKP+PG++RVT +K  N +F I  PDV+K+     Y+VFGE K++D + +L   Q QAA   K P     ++A+   +       +A  ++DE   VDE+G++ +DIELVM QA V R++AVKAL
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKT-QGGNYVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNKAVKAL 152          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.703e-17
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF--------------KVPPPNTGNVASKPESSAMVQDDEX----VDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KL +K I G+SRVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   Q Q A+Q               K P   T ++          +D+E     +DETG++PKDIE+V+ Q  V R++AVKAL
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAKAVKAL 163          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17
Identity = 50/126 (39.68%), Postives = 82/126 (65.08%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL------QTQAAEQFKVPPPNTGNVASKPESSAMVQD----DEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KLG+K + G++RV +++ KNIL +I++P V+KS +++ YIV G+  +ED+++Q       Q QA E  +       +  ++P  +A +++    ++ VDETGV+ KDIELVM QA V R++AV AL
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTAL 157          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF---------------KVPPPNTGNV------ASKPESSAMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TY+VFGEAK++D++ ++   Q Q A+Q                K P   T ++        +  + A   D+E VDETG+ PKDI+L++ Q  V R  AVKAL
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQAG-TYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRGSAVKAL 167          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.696e-16
Identity = 44/125 (35.20%), Postives = 72/125 (57.60%), Query Frame = 2
Query:  179 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQ-----TQAAEQFKVPPPNTGNVASKPESSAMV-QDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TY+VFG+   +D++S+LQ         +  K   P    V    ES  +V Q  +  D  GV PKD+E+VM +    R + V+ L
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETL 143          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.696e-16
Identity = 49/139 (35.25%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQ--FKVPPPNTGNVASKPESSAMV------------------QDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KL +K I G++RVT K+  N+++ I +PDVF+S ++ TY+VFGEAK++D++ ++   Q Q A+Q         TG    + +S   +                   DD  VDE+G++ KDI++++ Q  V R++AVKAL
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAKAVKAL 165          
BLAST of CX293843 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 45/129 (34.88%), Postives = 75/129 (58.14%), Query Frame = 2
Query:  188 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT-------------QAAEQFKVPPPNTGNVASKPESSAMVQDDEXVDETGVEPKDIELVMTQAGVPRSRAVKAL 535
            KLG+K I G++RVT +K  N +F I  P+V++S   + Y+VFGEAKI++ S +L               +  +  ++     G+ ++KP ++A   D+  VD   +  +DIELV +QA V +++A+KAL
Sbjct:   26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKAL 153          
The following BLAST results are available for this feature:
BLAST of CX293843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_BABDI2.211e-1940.30Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICGU2.888e-1939.10Nascent polypeptide-associated complex subunit alp... [more]
NACA_KLULA2.888e-1943.48Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO5.447e-1842.19Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL2.703e-1737.96Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO3.531e-1739.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL3.531e-1737.86Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI8.696e-1635.20Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA8.696e-1635.25Nascent polypeptide-associated complex subunit alp... [more]
NACA_VANPO2.530e-1534.88Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC05001E06SK FlavSen1 Citrus clementina cDNA clone C05001E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293843 ID=CX293843; Name=CX293843; organism=Citrus clementina; type=EST; length=537bp
CGCTGCCCATCTTGAAGAGCAAAAGCTCAACCCCGATGAGCCTGTAGTCG
AGGACGACGATNATGAGGATGATGATGAGGAGGATGAGGATGATGACAAG
GATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTCGCTCAAAACA
GAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAACTTGGAATGA
AGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAGCAAAAATATT
TTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTACATCTGACAC
ATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGTTCACAACTGC
AAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAACACAGGTAAT
GTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATGACGAANAAGT
AGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTAATGACTCAAG
CTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCAA
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