CX293844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS22_CANAL (40S ribosomal protein S22 OS=Candida albicans GN=RPS22A PE=3 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.196e-24 Identity = 50/66 (75.76%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 LNGRLNKCGVI PRF+V + +IE WT LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y Sbjct: 65 LNGRLNKCGVIQPRFNVKINDIERWTDNLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS15A_PONAB (40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.196e-24 Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GRLNKCGVISPRFDV +K++E W L PSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+ Sbjct: 65 LTGRLNKCGVISPRFDVQLKDLEKWQNNLFPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 1.562e-24 Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GRLNKCGVISPRFDV +K++E W LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK LGFF+ Sbjct: 65 LTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKSLGFFF 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS22_ASHGO (40S ribosomal protein S22 OS=Ashbya gossypii GN=RPS22A PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.041e-24 Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y Sbjct: 65 LTGRLNKCGVISPRFNVKINDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVAGKILGFVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 3.258e-22 Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCGVISPRFDV + EIE W + LLPSRQFG+IVLTTS GIMDH EA+ ++ GGK+LGFFY Sbjct: 65 LIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRHTGGKLLGFFY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS22_SCHPO (40S ribosomal protein S22 OS=Schizosaccharomyces pombe GN=rps22a PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.255e-22 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 LNGR+NKCGVISPRF+V +K+IE W +LLPSRQ G IVLTTS GIM H EAR K+ GGK+LGFFY Sbjct: 65 LNGRINKCGVISPRFNVKLKDIEKWVNQLLPSRQVGVIVLTTSRGIMSHNEARAKDAGGKILGFFY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS22_AGABI (40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.049e-20 Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 LNGRLNK GVISPRF+V IE W LLPSR G IVLTTS+GI+DHEEARRKNVGGK+LG+ Y Sbjct: 65 LNGRLNKTGVISPRFNVQHNRIEQWINYLLPSRGIGIIVLTTSSGILDHEEARRKNVGGKLLGYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.155e-17 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+N C ++ R DV KEIE +T R LP+RQ+GY+V+TT GI+DHEEA ++NVGG+VLGFFY Sbjct: 64 LQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.181e-17 Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L+G +NKCGVI+PRF V V+++E W R LP + FG I+LTTS G+M HE+AR+ VGG++LG+ + Sbjct: 65 LSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGELLGYVF 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.566e-16 Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L+GR+NKCG I+PR+ VG+ E+E W R LP + FG ++L+TS G++ H +AR+ +GG++LGF Y Sbjct: 65 LSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGELLGFVY 130 The following BLAST results are available for this feature:
BLAST of CX293844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293844 ID=CX293844; Name=CX293844; organism=Citrus clementina; type=EST; length=409bpback to top |