CX293844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: R15A2_ARATH (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.261e-15 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+N C ++ R DV EI +T R LP+RQ+GYIV+TT GI+DHEEA ++NVGG+VLGFF+ Sbjct: 64 LQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNVGGQVLGFFH 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_UNCMA (30S ribosomal protein S8P OS=Uncultured methanogenic archaeon RC-I GN=rps8p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.857e-15 Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCGV+ PRF VG E+E W R LP+R FG ++LTTS G+M H +A + +GG++L + Y Sbjct: 65 LIGKINKCGVVKPRFAVGKTEMEKWEKRYLPARNFGTLILTTSKGVMSHYDAAKMGIGGEILAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.038e-15 Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+N+CGVI PRF + V E+E W R LP+R FG ++L+TS G+M H +AR + +GG +L + Y Sbjct: 64 LLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.579e-15 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCG I PR+ VGV E E W + LP++ FG ++LTT G++ EAR NVGG++L F Y Sbjct: 65 LIGRINKCGAIKPRYSVGVTEFERWEKQFLPAKNFGVLILTTPKGVISQYEARENNVGGQLLSFVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METB6 (30S ribosomal protein S8P OS=Methanoregula boonei (strain 6A8) GN=rps8p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.593e-15 Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCG I PRF V + E+E W + LP + FG ++L+TS G+M H +ARR+ +GG++LG+ Y Sbjct: 65 LTGKINKCGAICPRFSVQLDEMEYWEKQYLPGKNFGLMILSTSHGVMSHVQARREGIGGELLGYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METMJ (30S ribosomal protein S8P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps8p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.466e-14 Identity = 30/66 (45.45%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L+G +NKCG ISPRF V + ++E W ++ LP++ FG ++++TS G++ H EAR + +GG++LG+ Y Sbjct: 65 LSGTINKCGAISPRFPVAMADMEYWESQYLPAKNFGILIVSTSKGVISHAEARNEGIGGQLLGYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METMA (30S ribosomal protein S8P OS=Methanosarcina mazei GN=rps8p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCG I PR+ VG E W + LP++ FG ++LTTS+G+M EAR K +GG++L + Y Sbjct: 65 LVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G +N+CG + PR+ G E E W R LP+R +G +V+TTS GIM H EAR + VGG+V+ + Y Sbjct: 65 LKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_NATPD (30S ribosomal protein S8P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps8p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.570e-14 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G +N+CG + PR+ G E E W R LP+R +G +++TTS G+M H EAR + +GG+V+ + Y Sbjct: 65 LKGAINECGAVKPRYSAGADEFEKWEKRFLPARDYGTLIVTTSHGVMSHYEAREQGIGGQVIAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.570e-14 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 65 LVGRVNKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALIITTSSGVMSQYEAREKKIGGQLLAYVY 130 The following BLAST results are available for this feature:
BLAST of CX293844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293844 ID=CX293844; Name=CX293844; organism=Citrus clementina; type=EST; length=409bpback to top |