CX293844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_PYRHO (30S ribosomal protein S8P OS=Pyrococcus horikoshii GN=rps8p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.158e-13 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NK G I PRF V E E W R LP+ +FG ++++TS G+M H+EAR + +GG+++ + Y Sbjct: 65 LLGRINKAGAIKPRFPVKATEYEKWEKRFLPAFEFGILIVSTSQGVMSHKEARDRGIGGRLIAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NK G I PRF V +E E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 65 LIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METKA (30S ribosomal protein S8P OS=Methanopyrus kandleri GN=rps8p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.372e-12 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+N CGVI PR V E E W R LP+R FG +++TT G+M H EA+ + +GG++L + Y Sbjct: 65 LVGRINDCGVIKPRHPVKKDEWEYWEQRYLPARDFGLLIVTTPEGVMSHYEAKERGIGGRLLAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.340e-12 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCG I PR+ V E E + R LP+R FG ++++TS GIM H EA+ K +GG+++ + Y Sbjct: 65 LIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRLISYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.056e-12 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 LN +N CGVI PRF V + +E + AR LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 64 LNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.056e-12 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 65 LIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_PICTO (30S ribosomal protein S8P OS=Picrophilus torridus GN=rps8p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.056e-12 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L+ +N CGVI PR V IE + +R LP++ FG I+LTT+ GIM H EAR+ +GGK+L + Y Sbjct: 64 LSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.213e-12 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G +NKCGVI PR V E E + R LP++ FG +++TT GIM H EA+ + +GG++L + Y Sbjct: 65 LEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.213e-12 Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCG I PRF V E + R LP+R FG ++++T+ G+M HEEA+++ +GG++L + Y Sbjct: 65 LIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_THEVO (30S ribosomal protein S8P OS=Thermoplasma volcanium GN=rps8p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.809e-12 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 LN +N CGVI PRF V + +E + +R LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 64 LNTTINNCGVIKPRFPVKNENLEKYESRYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129 The following BLAST results are available for this feature:
BLAST of CX293844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293844 ID=CX293844; Name=CX293844; organism=Citrus clementina; type=EST; length=409bpback to top |