CX293844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCG I+PR+ + +E + + R LPS++ G I+++T G+M H+EA R+ GG VLG+ Y Sbjct: 65 LMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METM7 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps8p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCG + PRF V + E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 65 LIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_HYPBU (30S ribosomal protein S8P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps8p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11 Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NK GVI PRF V K++ W + LPSR G ++++TS G+M H EA ++ +GG +L + Y Sbjct: 65 LLGRINKAGVIKPRFSVKYKDLIRMPDWLRKYLPSRDIGILIISTSQGVMSHREAIQRRIGGVLLAYVY 133
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_METM6 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps8p PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++NKCG + PRF V + E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 65 LIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARSAGVGGRLISYIY 130
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L+G +N CG I PRF V E E + R LP+R FG ++++T+ G+M ++AR++ +GG +L + Y Sbjct: 64 LSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 65 LLGRVNKCGPITPRYPLSYRQMIALPDYVRRYLPSKEIGIIIVSTSKGVMSHKEAARLRIGGVALGYVY 133
BLAST of CX293844 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 2 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 199 L G++N G I PR+ V +EI W + LP+RQ G +V++TS G+M H EA+ + +GG +L + Y Sbjct: 65 LLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130 The following BLAST results are available for this feature:
BLAST of CX293844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293844 ID=CX293844; Name=CX293844; organism=Citrus clementina; type=EST; length=409bpback to top |