CX293865

Overview
NameCX293865
Unique NameCX293865
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_AOTTR (Uricase OS=Aotus trivirgatus GN=UOX PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 5.941e-13
Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+A AK  K   S+E FA+ + +HF S +  V    V + E PW+ +  +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDIIPTDTIKNTVHALAK-FKGIKSIEAFAVNICQHFLSSFNHVIRTQVYVEEIPWKRLEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_CANFA (Uricase OS=Canis familiaris GN=UOX PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.013e-12
Identity = 52/138 (37.68%), Postives = 70/138 (50.72%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   YV  DNSDI+ TDTIKNTV+  AK  K   S+E FA+ + +HF S +  V  A V + E PW+    +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYVYGDNSDIIPTDTIKNTVHVLAK-FKGIKSIETFAMNICEHFLSSFNHVIRAQVYVEEVPWKRFEKNGVKHVHAFIHNPTGTHFCEVEQMRSGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_RAT (Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.729e-12
Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF 381
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  K   S+E FA+ + +HF S +  VT A V + E PW+    +G  H H F
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLRSKKDYLHGDNSDIIPTDTIKNTVHVLAK-FKGIKSIETFAMNICEHFLSSFSHVTRAHVYVEEVPWKRFEKNGVKHVHAF 131          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_EMENI (Uricase OS=Emericella nidulans GN=uaZ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.258e-12
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   40 RHGKARVRVARVWRS-KEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSER-HTTEVTVQESGTLQMTS 450
            R+GK  VRV +V +  K G   + E  V + L  +   +Y   DNS IVATD+IKNT++  AK+       E F  +L  HF + Y+ +  A   I+   W  +++DG+ H H F   SE     +V V E   + + S
Sbjct:    8 RYGKDNVRVYKVHKDPKTGVQTVTEMTVCVLLEGEIDTSYTKADNSVIVATDSIKNTIFILAKQ-NPVTPPELFGSILGTHFINKYKHIHVAHTNIITHRWTRLNIDGKPHSHSFVRDSEETRNVQVDVTEGVGIDIKS 145          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_MOUSE (Uricase OS=Mus musculus GN=Uox PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.949e-12
Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  +   ++E FA+ + +HF S +  VT A V + E PW+    +G  H H F    +  H  EV    +G   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLRSKKDYLHGDNSDIIPTDTIKNTVHVLAK-LRGIRNIETFAMNICEHFLSSFNHVTRAHVYVEEVPWKRFEKNGIKHVHAFIHTPTGTHFCEVEQMRNGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_PIG (Uricase OS=Sus scrofa GN=UOX PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF 381
            +GK  ++V  + R  +  H + E   S+ L   S   Y+  DNSD++ TDTIKNTV   AK  K   S+E FA+ + +HF S ++ V  A V + E PW+    +G  H H F
Sbjct:   21 YGKDMIKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDVIPTDTIKNTVNVLAK-FKGIKSIETFAVTICEHFLSSFKHVIRAQVYVEEVPWKRFEKNGVKHVHAF 131          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_BOVIN (Uricase OS=Bos taurus GN=UOX PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 5.030e-12
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L  +S   Y+  DNSDI+ TDTIKNTV   AK  K   S+E FA+ + +HF S +  V    V + E PW+    +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLNSRREYLHGDNSDIIPTDTIKNTVQVLAK-FKGIKSIETFAMNICEHFLSSFNHVIRVQVYVEEVPWKRFEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_PAPHA (Uricase OS=Papio hamadryas GN=UOX PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  K   S+E F + + ++F S +  V  A V + E PW+ +  +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDIIPTDTIKNTVHVLAK-FKGIKSIEAFGVNICEYFLSSFNHVIRAQVYVEEIPWKRLEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_MACMU (Uricase OS=Macaca mulatta GN=UOX PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  K   S+E F + + ++F S +  V  A V + E PW+ +  +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDIIPTDTIKNTVHVLAK-FKGIKSIEAFGVNICEYFLSSFNHVIRAQVYVEEIPWKRLEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSG 156          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_MACFA (Uricase OS=Macaca fascicularis GN=UOX PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  K   S+E F + + ++F S +  V  A V + E PW+ +  +G  H H F    +  H  EV    SG   + SG
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDIIPTDTIKNTVHVLAK-FKGIKSIEAFGVNICEYFLSSFNHVIRAQVYVEEIPWKRLEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSG 156          
The following BLAST results are available for this feature:
BLAST of CX293865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
URIC_AOTTR5.941e-1336.96Uricase OS=Aotus trivirgatus GN=UOX PE=3 SV=3[more]
URIC_CANFA1.013e-1237.68Uricase OS=Canis familiaris GN=UOX PE=2 SV=3[more]
URIC_RAT1.729e-1239.82Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3[more]
URIC_EMENI2.258e-1233.81Uricase OS=Emericella nidulans GN=uaZ PE=3 SV=1[more]
URIC_MOUSE2.949e-1235.51Uricase OS=Mus musculus GN=Uox PE=1 SV=2[more]
URIC_PIG3.851e-1237.17Uricase OS=Sus scrofa GN=UOX PE=2 SV=3[more]
URIC_BOVIN5.030e-1236.23Uricase OS=Bos taurus GN=UOX PE=2 SV=3[more]
URIC_PAPHA8.579e-1235.51Uricase OS=Papio hamadryas GN=UOX PE=2 SV=3[more]
URIC_MACMU8.579e-1235.51Uricase OS=Macaca mulatta GN=UOX PE=3 SV=3[more]
URIC_MACFA8.579e-1235.51Uricase OS=Macaca fascicularis GN=UOX PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC05001G11SK FlavSen1 Citrus clementina cDNA clone C05001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293865 ID=CX293865; Name=CX293865; organism=Citrus clementina; type=EST; length=455bp
AAAATGGCGAAAAAAATAGAGGGATTCAATTTCGAGCAGCGACACGGGAA
AGCTCGAGTGAGAGTTGCAAGAGTTTGGCGAAGCAAAGAAGGCCGCCATT
TTATGGTCGAATGGAACGTCAGCATCAGCTTGCTCTCCGATTCCATCATC
GCCTACGTTGACGACGATAACTCCGATATCGTCGCCACCGATACCATAAA
AAATACTGTTTACGCTAAAGCTAAGGAATGTAAAGAGCAACTTTCAGTCG
AGGAATTTGCTATTTTACTCGCCAAGCACTTTACGTCCTTTTATCGCCAG
GTTACTAGTGCCATAGTGAGGATAGTGGAAAAGCCATGGGAATGTGTATC
CGTGGATGGGCAACTGCATGAGCATGGTTTCAAACTTGGATCTGAGAGGC
ACACAACAGAGGTTACAGTACAGGAGTCTGGTACTTTGCAGATGACTTCT
GGCAT
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