CX293866

Overview
NameCX293866
Unique NameCX293866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF ++M  K+ + DS+EEL +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF  MM  K+ + DS+EE+ +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG+VN +EF+ MM
Sbjct:   52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF  MM  K+ + DS+EE+ +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG+VN +EF+ MM
Sbjct:   52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF ++M  K+ + DS+EEL +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF  +M  K+ + D++EEL++AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF++MM
Sbjct:   52 MINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF ++M  K+ + DS+EEL +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF ++M  K+ + DS+EEL +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF ++M  K+ + DS+EEL +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_DROME (Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF  MM  K+ + DS+EE+ +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG+VN +EF+ MM
Sbjct:   52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
[Close]
BLAST of CX293866 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = -2 
Query:  330 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 614
            MI +VD DG+G ID  EF  MM  K+ + DS+EE+ +AF + D+D NG ISA +++ +   LG   TD E+ EM+ EAD D DG+VN +EF+ MM
Sbjct:   52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
The following BLAST results are available for this feature:
BLAST of CX293866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
CALM_MEDSA2.061e-2046.32Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_LUMRU2.061e-2048.42Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_LOCMI2.061e-2048.42Calmodulin OS=Locusta migratoria PE=1 SV=2[more]
CALM_LILLO2.061e-2046.32Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_KARMI2.061e-2046.32Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_HORVU2.061e-2046.32Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN2.061e-2046.32Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH2.061e-2046.32Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_DROME2.061e-2048.42Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 ... [more]
CALM_CAEEL2.061e-2048.42Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC05001G12SK FlavSen1 Citrus clementina cDNA clone C05001G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293866 ID=CX293866; Name=CX293866; organism=Citrus clementina; type=EST; length=621bp
GAGAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTACAAGA
CTGGCAATCATGCACGAACATATGCATATTTGATTTAACAGGATCTCGAA
GCATTCCCATATATATACCTTAGACCTACACAGATCAATTAAATAACAAA
AGACAGCTACATATTAAATAAATTTGCAAGCATAAAATTTAGCCAAAACA
ATGAACCATCACTTATCAATCCATGATTATTTTCCTTTCAACTTGGCACA
AAGTATATACTACAGCTACCATGCATCAACAACCCTTCTTCATCCTTATG
GATCTCTAGTACCCGAATGTGGTCCTCTTCATCATACGGATAAACTCATC
AGCGTTTACTTCTCCATCATGATCTCTGTCTGCTTCCTCTACCATCTCAT
GAATCTCTCGGTCAGTGAAGTTTACACCCAGCTCCCTCGCAATACGCTTA
ATATCTCCAGCTGATATCTTTCCATTGTTATCTTGGTCAATGATATGGAA
TGCTTTCATGAGCTCTTCCTTAGAATCCCTTTCTCCAATCTTAGCCGTCA
TCATATGTTCAAATTCATCTAAATCAATGGCACCACTTCCATCCTTGTCG
ACATCTGCAATCATTTGATTG
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