CX293868

Overview
NameCX293868
Unique NameCX293868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length397
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9410 contig Ccv1_Contig9410:454..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-----AFTPPEYLRT 395
            +F+ E   + Q+    +V L+GCC E E  +LV E +PN  L K L H  ++  M W +R+R+++ +A AL Y  S+    +YH D+ T  IL D+    ++S FG  ++    +++ T L      +  PEY +T
Sbjct:  461 EFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQT 596          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSK--GRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNL----AFTPPEYLRT 395
            R+F+ E   +       LV LIG C EG++RLLV E+MP  +L  HL    +  +P+ W  R+++A   A+ L+Y   +     +Y DL    IL  +D  P+LS FGL K   S D    ST +     +  P+Y  T
Sbjct:  143 REFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMT 281          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMK----WAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST------NLAFTPPEYL 389
            +F  E   V +L+   LV L+G   +GEE++LV EF+PN++L   LF   N   K    W  R  +   + + L Y     R   ++ D+    IL D D NP+++ FG+ +N RD ++  +         + PPEY+
Sbjct:  386 EFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYV 523          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.768e-12
Identity = 38/115 (33.04%), Postives = 69/115 (60.00%), Query Frame = 3
Query:    3 DSRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 341
            ++R+F  E   +  +R   +VNL+G   E  ERLLV E+MP+ TL  HL H    P+ W++R+++A+  A+ L+Y  ++   R ++ D+ +  +L D +   R++ FGL+ +S +
Sbjct:  559 NTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHL-HSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNE 672          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.309e-12
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ--PMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-----STNLAFTPPEYLRT 395
            ++F+ E   + Q+    +V L+GCC E E  +LV EF+ N  L KH+   E+    M W MR+R+A+ +A AL Y  SS    +YH D+ +  IL D+    +++ FG  ++    +++     S  + +  PEY ++
Sbjct:  492 QEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQS 629          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.309e-12
Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-----AFTPPEY 386
            +F+ E   + Q+    +V L+GCC E E  +LV E++PN  L K L   +++  M W +R+R+A+ +A AL Y  S       + D+ T  IL D+    ++S FG  ++    +++ T L      +  PEY
Sbjct:  468 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEY 600          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.309e-12
Identity = 42/136 (30.88%), Postives = 70/136 (51.47%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMK------NSRDGKSYSTNLAFTPPEY 386
            + +F  EA  V +L+ + LV L+G C EGEE++LV EF+PN++L   LF    Q  + W  R  +   +A+ + Y     R   ++ DL    IL D D NP+++ FG+ +      +  + +  +    +  PEY
Sbjct:  383 AEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEY 518          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN---QPMKWAMRVRVALYLAQALDYCSSKGR-ALYH-DLNTYRILFDQDGNPRLSCFGL-----MKNSRDGKSY-----STNLAFTPPEYLR 392
            Q L E R + Q+    LV L+GCC + E  LL+ EF+PN TL +HL    +   +P+ W  R+++A   A+ L Y  S  +  +YH D+ +  IL D+  N ++S FGL     +  + + +S+        L +  PEY R
Sbjct:  403 QILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYR 544          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-----STNLAFTPPEYLRT 395
            ++F+ E   + Q+    +V L+GCC E E  +LV EF+ N  L KH+   E  +  M W MR+R+A+ +A AL Y  S+    +YH D+ +  IL D+    +++ FG  ++    +++     S  + +  PEY R+
Sbjct:  483 QEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRS 620          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12
Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRT 395
            +F+ E   + Q+    +V L+GCC E E  +LV EF+PN  L K L    ++  M W +R+ +A+ +A AL Y  S+    +YH D+ T  IL D+    ++S FG  ++    +++ T        +  PEY ++
Sbjct:  456 EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQS 591          
The following BLAST results are available for this feature:
BLAST of CX293868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
WAKLI_ARATH7.938e-1332.35Wall-associated receptor kinase-like 22 OS=Arabido... [more]
RLCK7_ARATH7.938e-1334.53Probable serine/threonine-protein kinase RLCKVII O... [more]
CRK30_ARATH7.938e-1331.16Putative cysteine-rich receptor-like protein kinas... [more]
ACCR1_ARATH1.768e-1233.04Serine/threonine-protein kinase-like protein CCR1 ... [more]
WAKLN_ARATH2.309e-1231.16Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLC_ARATH2.309e-1230.83Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
CRK35_ARATH2.309e-1230.88Putative cysteine-rich receptor-like protein kinas... [more]
WAKLQ_ARATH3.016e-1233.10Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLM_ARATH3.016e-1231.16Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLB_ARATH3.016e-1230.88Wall-associated receptor kinase-like 2 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05001H03SK FlavSen1 Citrus clementina cDNA clone C05001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293868 ID=CX293868; Name=CX293868; organism=Citrus clementina; type=EST; length=397bp
CCGATTCCAGACAGTTCCTTGAGGAGGCAAGAGCGGTGGGGCAGTTAAGG
AGTGAGAGGTTGGTGAATTTGATAGGGTGTTGCTGTGAAGGCGAGGAGAG
ATTGCTTGTGGCTGAGTTTATGCCAAATGAGACTCTCTCTAAACATCTTT
TCCATTGGGAAAACCAACCCATGAAATGGGCAATGAGGGTGAGAGTGGCT
CTGTATCTCGCACAAGCTCTGGATTATTGCAGCAGTAAAGGGAGGGCATT
ATATCACGACCTTAATACTTATAGGATTTTATTTGATCAGGATGGTAATC
CCAGGCTCTCCTGCTTTGGCCTTATGAAGAATAGTAGAGATGGCAAGAGC
TATAGTACAAACTTGGCTTTCACTCCCCCAGAATACTTGAGAACAGG
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