CX293868

Overview
NameCX293868
Unique NameCX293868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length397
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9410 contig Ccv1_Contig9410:454..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMK-WAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-----STNLAFTPPEY 386
            +F+ E   + Q+    +V L+GCC E E   LV EF+PN  L +H+    +   K W MR+R+A+ +A AL Y  S+    +YH D+ +  IL D+    ++S FG  ++     ++     S  + +  PEY
Sbjct:  491 EFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEY 623          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-----AFTPPEY 386
            +F+ E   + Q+    +V LIGCC E E  +LV E++PN  + K L    ++  M W +R+R+A+ +A AL Y  S+    +YH D+ T  IL D+    ++S FG  ++    +++ T +      +  PEY
Sbjct:  472 KFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEY 604          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPE 383
            S++F  E   + ++    LV+L+G CCEG+   LV EF+PN  L +HL     N  + W++R+R+AL  A  L+Y         ++ D+ T  IL D++   +L+ FGL ++      S++  + +  L +  PE
Sbjct:  602 SKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPE 736          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ--PMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-STNLA----FTPPEY 386
            +R+FL E  A+  L+   LV L G C E  + LL  E+M N +LS  LF  +++  PM W  R ++   +A+ L +   +   + ++ D+    IL D+D  P++S FGL +   + K++ ST +A    +  PEY
Sbjct:  719 NREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEY 854          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMK 329
            ++F  E   V +L+   LV L+G C EGEE++LV EF+PN++L   LF    Q  + W+ R ++   +A+ + Y     R   ++ DL    IL D D NP+++ FG+ +
Sbjct:  383 KEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMAR 492          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMK 329
            ++F  E   V +L+   LV L+G C EGEE++LV EF+PN++L   LF       + W  R ++   +A+ + Y     R   ++ DL    IL D D NP+++ FG+ +
Sbjct:  365 KEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMAR 474          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK--HLFHWENQPMKWAMRVRVALYLAQALDYCSS--KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRT 395
            ++F  E   +G++R + LV L+G C EG  R+LV +F+ N  L +  H    +  P+ W +R+ + L +A+ L Y     + + ++ D+ +  IL D+  N ++S FGL K      SY T        +  PEY  T
Sbjct:  193 KEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACT 330          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL-FHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRT 395
            +F+ E   + Q+    +V L+GCC E E  +LV EF+PN  L K L    ++  M W +R+ +A+ +A AL Y  S+    +YH D+ T  IL D+    ++S FG  ++    +++ T        +  PEY ++
Sbjct:  464 EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQS 599          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN--SRDGKSYST----NLAFTPPEYLR 392
            +F  E   + +LR   LV+LIG C E  E +LV ++M + T+ +HL+  +N  + W  R+ + +  A+ L Y    +K   ++ D+ T  IL D+    ++S FGL K   + D    ST    +  +  PEY R
Sbjct:  577 EFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFR 711          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR------DGKSYSTNLAFTPPEYL 389
            ++F  E   V +L+   LV ++G C EGEE++LV EF+PN++L + LF   +   + WA R ++ +  A+ + Y    S  + ++ DL    IL D +  P+++ FG+ +  R      D +       +  PEYL
Sbjct:  360 QEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYL 495          
The following BLAST results are available for this feature:
BLAST of CX293868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
WAKLK_ARATH1.146e-1131.58Putative wall-associated receptor kinase-like 11 O... [more]
WAKLE_ARATH1.146e-1131.58Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
RLK7_ARATH1.146e-1131.11Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
RKF1_ARATH1.146e-1132.35Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH1.146e-1134.55Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.146e-1133.64Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y1154_ARATH1.497e-1130.43Probable serine/threonine-protein kinase At1g01540... [more]
WAKLD_ARATH1.497e-1130.88Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
FERON_ARATH1.497e-1131.11Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK33_ARATH1.497e-1130.15Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05001H03SK FlavSen1 Citrus clementina cDNA clone C05001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293868 ID=CX293868; Name=CX293868; organism=Citrus clementina; type=EST; length=397bp
CCGATTCCAGACAGTTCCTTGAGGAGGCAAGAGCGGTGGGGCAGTTAAGG
AGTGAGAGGTTGGTGAATTTGATAGGGTGTTGCTGTGAAGGCGAGGAGAG
ATTGCTTGTGGCTGAGTTTATGCCAAATGAGACTCTCTCTAAACATCTTT
TCCATTGGGAAAACCAACCCATGAAATGGGCAATGAGGGTGAGAGTGGCT
CTGTATCTCGCACAAGCTCTGGATTATTGCAGCAGTAAAGGGAGGGCATT
ATATCACGACCTTAATACTTATAGGATTTTATTTGATCAGGATGGTAATC
CCAGGCTCTCCTGCTTTGGCCTTATGAAGAATAGTAGAGATGGCAAGAGC
TATAGTACAAACTTGGCTTTCACTCCCCCAGAATACTTGAGAACAGG
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