CX293868

Overview
NameCX293868
Unique NameCX293868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length397
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9410 contig Ccv1_Contig9410:454..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 40/135 (29.63%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST------NLAFTPPEYL 389
            +F  E   V +L+   LV L+G   +G+E++LV EF+PN++L   LF   +   + W  R  +   + + + Y     R   ++ DL    IL D D NP++  FG+ +N R  ++ +T       + + PPEY+
Sbjct:  352 EFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYV 486          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST------NLAFTPPEYL 389
            +F  E   V +L+ + LV L+G   EGEE++LV EF+PN++L   LF   +   + W  R  +   + + + Y     R   ++ DL    IL D + NP+++ FGL +N R  ++ +          + PPEY+
Sbjct:  403 EFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYV 537          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 38/134 (28.36%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYL 389
            QF  E   +  ++ + LV L+GC  EG + LLV E++ N +L + LF       + W  R  + + +++ L+Y    S+ + ++ D+ T  IL D++ +P+++ FGL+++    K+ +       L +  PEYL
Sbjct:  358 QFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYL 491          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11
Identity = 41/133 (30.83%), Postives = 68/133 (51.13%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-----AFTPPEY 386
            +F+ E   + Q+    +V L+GCC E E  +LV E++PN  L K L    ++  M W +R+R+A+ +A AL Y  S       + D+ T  IL D+    ++S FG  ++    +++ T L      +  PEY
Sbjct:  469 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEY 601          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11
Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN--SRDGKSYST----NLAFTPPEYLR 392
            +F  E   + +LR   LV+LIG C E  E +LV E+M N  L  HL+  +  P+ W  R+ + +  A+ L Y    +    ++ D+ T  IL D++   +++ FGL K   S D    ST    +  +  PEY R
Sbjct:  550 EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFR 684          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11
Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGL 323
            +R+F  EA  V +L+   LV L+G C E EE++L+ EF+ N++L   LF  E Q  + W  R ++   +A+ + Y    S+ + ++ DL    IL D D NP+++ FGL
Sbjct:  388 TREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGL 496          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11
Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRT 395
            +F+ E   + Q+    +V L+GCC E +  +LV EF+PN  L +HL     EN    W +R+R+A+ +A AL Y  SS    +YH D+ +  I+ D+    ++S FG  +      ++ T      + +  PEY ++
Sbjct:  487 EFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQS 623          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 44/141 (31.21%), Postives = 71/141 (50.35%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK---NSRDGKSYST----NLAFTPPEYLR 392
            +++F  E   + +LR   LV+LIG C +  E +LV E+MP+ TL  HLF  +   + P+ W  R+ + +  A+ L Y    +K   ++ D+ T  IL D++   ++S FGL +    S      ST       +  PEY R
Sbjct:  564 AKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYR 704          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 43/136 (31.62%), Postives = 69/136 (50.74%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC---SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--DGKSYST----NLAFTPPEYLR 392
            +FL E   + ++R   LV+L+G C E  E +LV E+M    L  HL+   N P+ W  R+ V +  A+ L Y    SS+G  ++ D+ +  IL D +   +++ FGL ++    D    ST    +  +  PEY R
Sbjct:  529 EFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQG-IIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFR 663          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11
Identity = 41/135 (30.37%), Postives = 75/135 (55.56%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNLA----FTPPEYL 389
            +F  E   + +L+ + LV L+G C EG+E +LV EF+PN +L   +F  + +  + W +R R+   +A+ L Y    S+ + ++ DL    IL D + NP+++ FG  +  +S + ++ +  +A    +  PEYL
Sbjct:  388 EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYL 522          
The following BLAST results are available for this feature:
BLAST of CX293868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CRK24_ARATH1.497e-1129.63Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK21_ARATH1.497e-1130.37Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK1_ARATH1.497e-1128.36Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
WAKLA_ARATH1.955e-1130.83Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
THE1_ARATH1.955e-1131.85Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CRK11_ARATH1.955e-1135.78Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
WAKLH_ARATH2.553e-1130.66Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y5389_ARATH3.335e-1131.21Probable receptor-like protein kinase At5g38990 OS... [more]
Y5241_ARATH3.335e-1131.62Probable receptor-like protein kinase At5g24010 OS... [more]
CRK40_ARATH4.355e-1130.37Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05001H03SK FlavSen1 Citrus clementina cDNA clone C05001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293868 ID=CX293868; Name=CX293868; organism=Citrus clementina; type=EST; length=397bp
CCGATTCCAGACAGTTCCTTGAGGAGGCAAGAGCGGTGGGGCAGTTAAGG
AGTGAGAGGTTGGTGAATTTGATAGGGTGTTGCTGTGAAGGCGAGGAGAG
ATTGCTTGTGGCTGAGTTTATGCCAAATGAGACTCTCTCTAAACATCTTT
TCCATTGGGAAAACCAACCCATGAAATGGGCAATGAGGGTGAGAGTGGCT
CTGTATCTCGCACAAGCTCTGGATTATTGCAGCAGTAAAGGGAGGGCATT
ATATCACGACCTTAATACTTATAGGATTTTATTTGATCAGGATGGTAATC
CCAGGCTCTCCTGCTTTGGCCTTATGAAGAATAGTAGAGATGGCAAGAGC
TATAGTACAAACTTGGCTTTCACTCCCCCAGAATACTTGAGAACAGG
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