CX293868

Overview
NameCX293868
Unique NameCX293868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length397
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9410 contig Ccv1_Contig9410:454..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11
Identity = 43/136 (31.62%), Postives = 72/136 (52.94%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNL----AFTPPEYLR 392
            +F  E   + +L+   LV L+G C EG+E +LV EF+PN +L   +F  E +  + W MR R+   +A+ L Y    S+ R ++ DL    IL D   NP+++ FG+ +  N    ++ +  +     +  PEY+R
Sbjct:  379 EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVR 514          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11
Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMK 329
            + +F  E   V +L+   L  L+G C +GEE++LV EF+PN++L   LF  E  + + W  R ++   +A+ + Y     R   ++ DL    IL D D +P++S FG+ +
Sbjct:  385 AEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMAR 495          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.688e-11
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF---HWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-----AFTPPEY 386
            +F+ E   + Q+    +V L+GCC   E  +LV E++PN  L K L       +  M W +R+R+A+ +A AL Y  S+    +YH D+ T  IL D+    ++S FG  ++    +++ T L      +  PEY
Sbjct:  472 EFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEY 606          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.688e-11
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 3
Query:    3 DSRQ---FLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRT 395
            DSRQ   F+ E   + Q+    +V ++GCC E E  LLV EF+ N TL  HL H    +  + W  R+R+A+ +A  L Y  S      ++ D+ T  IL D++   +++ FG  K     K   T      L +  PEY  T
Sbjct:  449 DSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHL-HGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTT 590          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.688e-11
Identity = 38/133 (28.57%), Postives = 66/133 (49.62%), Query Frame = 3
Query:   15 FLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY-----STNLAFTPPEYL 389
            F  E   +  +  + LV L+GC C G E LLV E++ N++L + +F     + + W  R  + +  A+ L Y    S  + ++ D+    IL D     +++ FGL ++ +D KS+     +  L +  PEYL
Sbjct:  366 FYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYL 498          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11
Identity = 40/134 (29.85%), Postives = 72/134 (53.73%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYH-DLNTYRILFDQDGNPRLSCFGLMKN-SRDGKSYST----NLAFTPPEY 386
            ++F+ E   + Q+    +V L+GCC E E  +LV EF+PN  L +HL   +++    W +R+R+A+ ++ A  Y  +     +YH D+ +  IL D+    ++S FG  ++ S D   ++T     + +  PEY
Sbjct:  493 QEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEY 626          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11
Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   12 QFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 329
            +F+ E   V +L+   LV L+G C +GEER+L+ EF  N +L  ++F    +  + W  R R+   +A+ L Y    S+ + ++ D+    +L D   NP+++ FG+ K
Sbjct:  384 EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAK 492          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11
Identity = 40/145 (27.59%), Postives = 71/145 (48.97%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF---------HWENQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST------NLAFTPPEYL 389
            +++F  E   V +L+ + LV L+G C E +E++LV EF+PN++L+  LF           +   + W  R  +   + + L Y     R   ++ D+    IL D D NP+++ FG+ +N R  ++            + PPEY+
Sbjct:  359 TQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYV 503          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11
Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 3
Query:    9 RQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMK 329
            R+F  E   V +L+   LV L+G C EGEE++LV EF+ N++L   LF     + + W  R ++   +A+ + Y     R   ++ DL    IL D D NP+++ FG+ +
Sbjct:  547 REFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMAR 656          
BLAST of CX293868 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11
Identity = 41/137 (29.93%), Postives = 68/137 (49.64%), Query Frame = 3
Query:    6 SRQFLEEARAVGQLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYCSSKGR--ALYHDLNTYRILFDQDGNPRLSCFGLMKNS------RDGKSYSTNLAFTPPEYL 389
            +++F  E   V +L+   LV L+G C E EE++LV EF+PN++L   LF    Q  + W  R  +   + + + Y     R   ++ DL    IL D D  P+++ FG+ + S       + K  +    + PPEY+
Sbjct:  405 AQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYV 541          
The following BLAST results are available for this feature:
BLAST of CX293868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CRK38_ARATH4.355e-1131.62Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK25_ARATH4.355e-1132.43Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
WAKLF_ARATH5.688e-1131.11Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
WAK3_ARATH5.688e-1132.87Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
CRK2_ARATH5.688e-1128.57Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
WAKLL_ARATH7.429e-1129.85Putative wall-associated receptor kinase-like 13 O... [more]
CRK41_ARATH7.429e-1131.19Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK32_ARATH7.429e-1127.59Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH7.429e-1133.64Putative cysteine-rich receptor-like protein kinas... [more]
CRK12_ARATH7.429e-1129.93Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05001H03SK FlavSen1 Citrus clementina cDNA clone C05001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293868 ID=CX293868; Name=CX293868; organism=Citrus clementina; type=EST; length=397bp
CCGATTCCAGACAGTTCCTTGAGGAGGCAAGAGCGGTGGGGCAGTTAAGG
AGTGAGAGGTTGGTGAATTTGATAGGGTGTTGCTGTGAAGGCGAGGAGAG
ATTGCTTGTGGCTGAGTTTATGCCAAATGAGACTCTCTCTAAACATCTTT
TCCATTGGGAAAACCAACCCATGAAATGGGCAATGAGGGTGAGAGTGGCT
CTGTATCTCGCACAAGCTCTGGATTATTGCAGCAGTAAAGGGAGGGCATT
ATATCACGACCTTAATACTTATAGGATTTTATTTGATCAGGATGGTAATC
CCAGGCTCTCCTGCTTTGGCCTTATGAAGAATAGTAGAGATGGCAAGAGC
TATAGTACAAACTTGGCTTTCACTCCCCCAGAATACTTGAGAACAGG
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