CX293875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_THESM (Phenylalanyl-tRNA synthetase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pheS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.817e-21 Identity = 61/167 (36.53%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 21 KKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 K+ + LT E ++ G WK +EFK +N +A + G P +++ ++MGF EM + +E+ FWNFDALFQPQ HPARD DT+ L+ P E VERVK HE +W A + R H TA+S+R L + P KYF+ Sbjct: 202 KEEVSILTPELIKSGGWKNVEFKHFNIHAPVKRLYPGKKQPYRTFLDKIRRKLIEMGFIEMTVESLIETQFWNFDALFQPQNHPARDWTDTYQLKYPKYGFLPDETLVERVKASHEHGWITGSRGWGYKWDPRTAMLLMPRAHATALSARQLGKGVQ---IPGKYFA 365
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_PYRKO (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrococcus kodakaraensis GN=pheS PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.817e-21 Identity = 59/167 (35.33%), Postives = 86/167 (51.50%), Query Frame = 3 Query: 21 KKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 KK + LT E ++ G W+E+EF++++ A + G P +++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P E+ V RVK HE W E A + R H TA+ +R L E P KYF+ Sbjct: 200 KKEVSVLTPELIKSGKWREVEFRKFDIKAPVRRIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKVGSLPDEELVARVKAAHEHGGDTGSRGWGYVWSPERAMLLMPRAHGTALDARQLAKGVE---IPGKYFT 363
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_METS5 (Phenylalanyl-tRNA synthetase alpha chain OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pheS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.806e-21 Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 3 Query: 39 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP-EDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEK 491 +T E L G W+E EFK YN A G H +++KD+ + +GF E+ + +FVE+ F+NFD LFQPQ HPAR+ HD+F +E LP D V +VK VHE W + A + +LR+ TTAV++R+L ++ Sbjct: 183 VTHEMLTTGSWREYEFKPYNVEANPPFFPIGKTHYFRDFIEKVKDLMVGLGFVEV-SGDFVETEFFNFDMLFQPQDHPAREIHDSFVIEGKG---NLPGSDLVRKVKEVHE------KWWRYSWSEDNARRLVLRSQTTAVTARVLSGAPKR 324
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_AERPE (Phenylalanyl-tRNA synthetase alpha chain OS=Aeropyrum pernix GN=pheS PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.277e-21 Identity = 61/164 (37.20%), Postives = 89/164 (54.27%), Query Frame = 3 Query: 30 ATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPST-TRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 A LTR+ L+ G+W+ L FK YN A+ H L + ++L+DI ++GF E+ VE +NFD LFQ Q HPAR+ HD+ +++ P D VERV VHE W E A++ +LR+ TTAVS+R+ LA +P P ++F+ Sbjct: 198 AAVLTRDMLKSGEWRRLRFKPYNVKAEPPRVLPARRHFLAEFIERLRDILRELGFREV-RGPLVELELFNFDVLFQAQDHPAREIHDSLWIKSPRRGDLSGYSDLVERVASVHE------RGWKYRWSPEVASRYILRSQTTAVSARI---LATRPNPPARFFT 351
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_UNCMA (Phenylalanyl-tRNA synthetase alpha chain OS=Uncultured methanogenic archaeon RC-I GN=pheS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20 Identity = 61/161 (37.89%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 39 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVH-EXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 LT E + G W+ F++++ + Q GG H L +K ++MGF+EM V++ F+ D LF PQ HPAR D F L+EP LP++ VERV+RVH + EW A K +LR HTT++++R L A KP P+KYFS Sbjct: 197 LTPEMIATGSWQGKTFRKFDVSLPVQTEYGGRKHILRMGMDAVKRTLIEMGFKEME-GPMVDAEFYVNDLLFMPQDHPARTHWDQFNLKEPKYIHSLPQNLVERVRRVHRDGGSSGSLGWNYEWDETIARKLVLRGHTTSLTARYL-AKHSKP--PQKYFS 353
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_PYRAE (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrobaculum aerophilum GN=pheS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.875e-19 Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 15 KRKKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 K +V T +T E++ G W+ K ++ N + H + ++++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF+++ PE +E V RVHE +W R++A +LRT TTA + ++ALAE+ K F+ Sbjct: 178 KPAEVKTVITSEDIATGRWRNYTLKPFDLNIEPPEYPAPVPHFFNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYVQWSGPLETPPEHLMESVGRVHE------EKWRYKWDRKKALNPVLRTQTTATT---IRALAERGDGEYKVFT 335
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_PYRCJ (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pheS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.709e-18 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 15 KRKKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 K +V T LT E++ G W+E K ++ + + H + ++++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF++ E P +E V RVHE +W ++A +LRT TTA + ++ALAE+ K F+ Sbjct: 177 KPAEVKTALTSEDIATGRWREYYLKPFDLSIEPPQYPAPVPHFFNEFLNYVREVMVGLGFEEV-RGPILEVEFWNFDALFQAQDHPAREVHDTFYVHWDGPREEPPRHLMEAVGRVHE------EKWRYKWSPQKALNLVLRTQTTATT---IRALAERGEGAYKVFT 334
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_PYRAR (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=pheS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.808e-18 Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 3 Query: 24 KVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 +V T +T ++ G W+ K ++ + H + ++++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF++ PE +E V RVHE +W RE+A +LRT TTAV+ ++ALAE+ K F+ Sbjct: 180 EVKTAITSADIATGRWRTYLLKPFDLGVEPPEYPAPVPHFFNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYIRWEGPIEAPPEHLLEAVGRVHE------EKWRYKWSREKALNPVLRTQTTAVT---IRALAERGDGEYKVFT 334
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_TREPS (Phenylalanyl-tRNA synthetase alpha chain OS=Treponema pallidum subsp. pallidum (strain SS14) GN=pheS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.890e-17 Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 39 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYF 515 LT E L+ G WK + YN + G + + +KD + +GF+E VE+ FWN DALF PQ HPARD HD ++L+ P+ +PE ++ RV HE + R+ + LLR+ TA+S+R L P KYF Sbjct: 263 LTVECLKSGAWKTQHLRRYNVHIPPARIIPGRSNAYADFLEHIKDRLVALGFQEFD-GPLVETDFWNADALFMPQFHPARDIHDVYYLKHPTHAPTIPEPFLSRVAATHERGADSGSLGWRYSFDRDFTRRLLLRSQGTALSARHLPT----AHIPGKYF 417
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_TREPA (Phenylalanyl-tRNA synthetase alpha chain OS=Treponema pallidum GN=pheS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.890e-17 Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 39 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHE-XXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYF 515 LT E L+ G WK + YN + G + + +KD + +GF+E VE+ FWN DALF PQ HPARD HD ++L+ P+ +PE ++ RV HE + R+ + LLR+ TA+S+R L P KYF Sbjct: 263 LTVECLKSGAWKTQHLRRYNVHIPPARIIPGRSNAYADFLEHIKDRLVALGFQEFD-GPLVETDFWNADALFMPQFHPARDIHDVYYLKHPTHAPTIPEPFLSRVAATHERGADSGSLGWRYSFDRDFTRRLLLRSQGTALSARHLPT----AHIPGKYF 417 The following BLAST results are available for this feature:
BLAST of CX293875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293875 ID=CX293875; Name=CX293875; organism=Citrus clementina; type=EST; length=518bpback to top |