CX293875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_SULTO (Phenylalanyl-tRNA synthetase alpha chain OS=Sulfolobus tokodaii GN=pheS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.499e-17 Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 39 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 LT E L G+WK+ +EYN A G H + ++L+D+ +GF+E+ +++VE F+NFD LFQ Q HPAR+ HD+F + + E ++RVK++HE W + + +LR+ TTA ++R+ LA +P P + F+ Sbjct: 181 LTPELLASGEWKKYALREYNVEAYPPFYPIGKKHFFKEFLERLRDLMRDLGFKEV-YSDYVEIEFYNFDLLFQAQDHPAREIHDSFAISGKGKLTD--EKLIQRVKQIHE------RGWKYNWDVNISMRLMLRSQTTATTARV---LASRPKPPIRVFT 328
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_SULAC (Phenylalanyl-tRNA synthetase alpha chain OS=Sulfolobus acidocaldarius GN=pheS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16 Identity = 53/162 (32.72%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 33 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKYFS 518 T LT E L+ DWK+ + +EYN A H ++LKD+ ++GF E+ ++E +NFD LFQ Q HPAR+ HD+F ++ + E ++ +K +HE W + A + +LR+ TTAV++R+ L+ +P P K FS Sbjct: 179 TQLTSELLRSKDWKKYKIREYNVEALPPYFPLAKKHFFRDFIEKLKDVMKELGFTEVNAG-YIEMELYNFDLLFQAQDHPAREIHDSFRVDGLGKIDD--ERLLKEIKEMHE------KGWKYSWDPQIAKRLVLRSQTTAVTARI---LSSRPSVPFKGFS 328
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_BORBU (Phenylalanyl-tRNA synthetase alpha chain OS=Borrelia burgdorferi GN=pheS PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16 Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 33 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHEXXXXXXXXXXXEWKREEANKNL-LRTHTTAVSSRML 473 T LT E L+ ++ +F+ YN + G + L ++KD + +GF+E VE+ F+N DALF PQ HP+RD D +++ +PS LPE Y VK HE E+ +K L LRTH T +S++ L Sbjct: 226 TKLTPEILKNKTYENKKFRAYNIHIPSAKTFIGRANSYLDYISKIKDKLVGLGFQEFD-GPLVETEFFNNDALFMPQFHPSRDIKDVYYISDPSMQESLPEPYFSNVKLAHETGYATGSRGWRYSFSEDLSKRLVLRTHGTVLSAKQL 372
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_THENN (Phenylalanyl-tRNA synthetase alpha chain OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=pheS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 34/101 (33.66%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 6 YAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEE 308 ++ K+K++ L RE ++K + G + GH HP+LKV ++++ IF+ MGF+ + +E+++ NFDAL P+ HPARD HD+F++ + Sbjct: 70 FSEKKKQIEELLERERMEK--------MRVDVTLPGARRKVGHSHPVLKVMEEIERIFVSMGFDVVEGPE-IETTWHNFDALNTPEWHPARDEHDSFYITD 161
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_FERNB (Phenylalanyl-tRNA synthetase alpha chain OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pheS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 129 GHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTR 323 GHLH L KVR +L+DIF+ MGF + VE+ ++NFDAL P+ HPARD HD+F+++ R Sbjct: 107 GHLHILTKVRNELEDIFISMGFSVVEGPE-VETPWFNFDALNTPEWHPARDEHDSFYIDNEHLLR 170
BLAST of CX293875 vs. ExPASy Swiss-Prot
Match: SYFA_BACCN (Phenylalanyl-tRNA synthetase alpha chain OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pheS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 18 RKKVATDLTRE--NLQKGDWK-ELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTR 323 R+ + T L + NL+K + +L + + G+P E G HPL V +Q++D+F+ MG+E + VE ++NF+AL P+ HPARD DTF++ E + R Sbjct: 65 REAIQTRLEEKVSNLEKAVMEAKLASETIDVTLPGRPVETGCHHPLTAVVEQIEDVFIGMGYE-VAEGTEVEKDYYNFEALNLPKDHPARDMQDTFYITEETLLR 168 The following BLAST results are available for this feature:
BLAST of CX293875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293875 ID=CX293875; Name=CX293875; organism=Citrus clementina; type=EST; length=518bpback to top |