CX293877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.120e-43 Identity = 94/158 (59.49%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 38 MSLIPSIFGGRRTN-VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 MSLIP IFG RR++ +FDP S+DV+DPF L +++ ETS FAN RIDWKET +AHVFKADLPGL+ R+LQISGER+ E E+KNDKW RV+RSSGKF+RRFRLP+NAK++QVKASMENGVLTVT +IEIS Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPF-----RELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEIS 153
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.120e-43 Identity = 89/147 (60.54%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 68 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 RR+NVFDP + D WDPFDG S + +S R+T+ FANAR+DWKET ++HVFKADLPG++ G +L ISG+RSKE E+KNDKWHRV+RSSG+F+RRFRLP+NAKV+QVKASMENGVLTVT AIEIS Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEIS 148
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 7.257e-43 Identity = 93/160 (58.13%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 38 MSLIPSIFGGRRTN-VFDPVSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 MSLIP IFG RR++ +FDP S+DV+DPF GF S+ ++ E+S FAN RIDWKET + HVFK DLPGL+ R+LQISGER+ E E+KNDKWHR++RSSGKF+RRFRLP+NAK++QVKASMENGVLTVT +IEIS Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEIS 153
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.238e-42 Identity = 89/154 (57.79%), Postives = 105/154 (68.18%), Query Frame = 2 Query: 68 RRTNVFDPVSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 RR N FDP SLD+WDP DGF SS+ + P + + + FA ARIDWKET + HVFKAD+PGL+ G ILQISGERS+E EEK+DKWHRV+RSSGKFLRRFRLP+N K EQ+KASMENGVLTVT +I+IS Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQIS 158
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.111e-42 Identity = 88/158 (55.70%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 38 MSLIPSIFGG-RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 MS+IPS F RR+N+FDP SLDVWDPF SS+L+ RE S NAR+DW+ET +AHVFKADLPGL+ +L+ISGER E E+KND WHRV+RSSG+F RRFRLP+N K++QVKA+MENGVLTVT +I+IS Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.513e-40 Identity = 83/142 (58.45%), Postives = 102/142 (71.83%), Query Frame = 2 Query: 86 DPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 DP SLDVWDPF F +++ +A S +E S F + RIDWKET +AHVFKADLPGL+ R+LQISGER+ E E+KND+WHRV+RSSGKF+RRFRLP+NAK++QVKA+MENGVLTVT +IEIS Sbjct: 1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEIS 142
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.581e-40 Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 2 Query: 68 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 RR+NVFDP + D+W DPFD F S + S+ ET+ FANAR+DWKET +AHVFK DLPG++ G +L +SGERS+E E+KNDKWHRV+RSSGKF+RRFRLP++AKVE+VKA +ENGVLTVT AIEIS Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEIS 150
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.371e-40 Identity = 84/142 (59.15%), Postives = 100/142 (70.42%), Query Frame = 2 Query: 38 MSLIPSIFGGRR--TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 MSLIPS FG R ++FDP SLDVWDPF L S + ETS NAR+DWKETA+AHVFKADLPG++ +L+ISGER E EEK D WHRV+RSSG+F R+F+LP+N K++QVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVT 137
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.750e-40 Identity = 86/143 (60.14%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 38 MSLIPSIFGGRR---TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 MSLIPS FG R N+FDP SLDVWDPF PSS+ +S ANAR+DWKETA+AHVFKADLPG++ +L+ISGER E EEK D WHRV+RSSG F R+FRLP+N K++QVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVT 135
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.185e-39 Identity = 85/148 (57.43%), Postives = 104/148 (70.27%), Query Frame = 2 Query: 68 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 RRTNVFDP + D+W DPFD F S + ET+ FANAR+DWKET +AHVFKADLPG++ G +L +SGER+KE E+KNDKWHRV+RSSGKF+RRFRL ++AKVE+VKA +ENGVLTVT AI+IS Sbjct: 5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 The following BLAST results are available for this feature:
BLAST of CX293877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293877 ID=CX293877; Name=CX293877; organism=Citrus clementina; type=EST; length=509bpback to top |