CX293896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CATR_TETST (Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.011e-37 Identity = 75/142 (52.82%), Postives = 98/142 (69.01%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 LT++Q + +EAF LFD DG G I KEL MR+LG P + E++ MI + D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D+ G IS L+ V LGE +TDEE+ EMI EAD DGDG++N EEF ++M Sbjct: 1 LTEEQKQDIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIM 142
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC2_ANGAN (Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.116e-36 Identity = 74/145 (51.03%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT EL +I E D DG+GTIDF EFL +M R++K+ SEEEL E FRVFD + +GFI E ++ + GE +++EE+DE++ + D + DG+I+++E++K+M Sbjct: 12 LSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELDAIIEEVDEDGSGTIDFEEFLVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFGEILRSSGEPVSEEEIDELMADGDKNNDGKIDFDEWLKMM 156
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.116e-36 Identity = 77/150 (51.33%), Postives = 104/150 (69.33%), Query Frame = 2 Query: 2 RKMAD--QLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 RK+A +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+E D +G G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+++M Sbjct: 17 RKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC2_RABIT (Troponin C, skeletal muscle OS=Oryctolagus cuniculus GN=TNNC2 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.458e-36 Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I E D DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD + +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC2_PIG (Troponin C, skeletal muscle OS=Sus scrofa GN=TNNC2 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.458e-36 Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I E D DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD + +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNMDGYIDAEELAEIFRASGEHVTDEEIESIMKDGDKNNDGRIDFDEFLKMM 155
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I E D DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD + +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 74/148 (50.00%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD SEEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 74/148 (50.00%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD SEEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 74/148 (50.00%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD SEEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 74/148 (50.00%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD SEEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157 The following BLAST results are available for this feature:
BLAST of CX293896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 476
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293896 ID=CX293896; Name=CX293896; organism=Citrus clementina; type=EST; length=526bpback to top |