CX293896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 74/148 (50.00%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD SEEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 74/143 (51.75%), Postives = 99/143 (69.23%), Query Frame = 2 Query: 17 QLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+E D + G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+K+M Sbjct: 24 ELTEDQKQEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIM 166
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC2_MOUSE (Troponin C, skeletal muscle OS=Mus musculus GN=Tnnc2 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 4.242e-36 Identity = 72/145 (49.66%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I E D DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD + +G+I EL + GE +T+EE++ ++++ D + DG+I+++EF+K+M Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTEEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.242e-36 Identity = 73/148 (49.32%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF EFL +M R MKD +EEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana GN=CML9 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 2 Query: 8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 451 MAD TD+QI EF EAF L DKD DG IT ++L VM+S+G+NP +LQ M+++ D GNG I F +FL +MA+ + +EL E FRVFD D +G IS EL M ++G K+T EE + M+READ+DGDG +++ EF K+M+A Sbjct: 1 MADAFTDEQIQEFYEAFCLIDKDSDGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 73/147 (49.66%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454 D L+DDQ+S KEAF LFD DGDG I ELG +MRSLG NPT+A+L+ +I A + + DF FL+LMA+ +K + +L++AF+V D + GF++ A+LRH++T++GEKL E DE I+E DV DG+I YE+F+ M+AK Sbjct: 4 DGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--ASENLSSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 71/143 (49.65%), Postives = 101/143 (70.63%), Query Frame = 2 Query: 17 QLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+E D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N +EF+++M Sbjct: 24 ELTEDQKQEIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM 166
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CATR_CHLRE (Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 73/142 (51.41%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +EF+++M Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALML_DICDI (Calmodulin-like protein OS=Dictyostelium discoideum GN=calB PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.612e-35 Identity = 73/134 (54.48%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 44 FKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +KEAF LFDKD DG IT +ELG VMRS+G NPT+ EL+D+ E D DG+G +DF +F +LM RKMK +DSE ++K+AF+VFD NG+ + +L+H +T++GEKLT EE D M+++A DGQI+ +EFV+V+ Sbjct: 11 YKEAFNLFDKDKDGKITIQELGIVMRSVGSNPTQQELKDIAKEID-DGSGLVDFSKFSSLMTRKMKYSDSEADIKQAFKVFDKKGNGYANIQDLKHTLTSIGEKLTKEEFDNMLKDAKT-VDGQIHVDEFVRVI 142
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: TNNC1_COTJA (Troponin C, slow skeletal and cardiac muscles OS=Coturnix coturnix japonica GN=TNNC1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.591e-35 Identity = 71/148 (47.97%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 14 DQLTDDQISEFKEAFTLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E D DG+GT+DF +FL +M R MKD +EEEL + FR+FD + +G+I EL+ ++ GE +T+++++E++++ + + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDQFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGNKNNDGRIDYDEFLQFM 157 The following BLAST results are available for this feature:
BLAST of CX293896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 476
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293896 ID=CX293896; Name=CX293896; organism=Citrus clementina; type=EST; length=526bpback to top |