CX293896

Overview
NameCX293896
Unique NameCX293896
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CABP7_PAPAN (Calcium-binding protein 7 OS=Papio anubis GN=CABP7 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEE 262
            + +D++ E +EAF +FD+DG+G I+ +ELGT MRSLG  P E EL+ +I   D DG+G +DF EF+ L+  K+  +   E+
Sbjct:   30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEK 110          

HSP 2 Score: 69.3218 bits (168), Expect = 1.243e-11
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  248 DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            D  EE++EAF+VFD D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CABP7_MOUSE (Calcium-binding protein 7 OS=Mus musculus GN=Cabp7 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEE 262
            + +D++ E +EAF +FD+DG+G I+ +ELGT MRSLG  P E EL+ +I   D DG+G +DF EF+ L+  K+  +   E+
Sbjct:   30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEK 110          

HSP 2 Score: 69.3218 bits (168), Expect = 1.243e-11
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  248 DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            D  EE++EAF+VFD D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CABP7_HUMAN (Calcium-binding protein 7 OS=Homo sapiens GN=CABP7 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 2
Query:   20 LTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEE 262
            + +D++ E +EAF +FD+DG+G I+ +ELGT MRSLG  P E EL+ +I   D DG+G +DF EF+ L+  K+  +   E+
Sbjct:   30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEK 110          

HSP 2 Score: 69.3218 bits (168), Expect = 1.243e-11
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  248 DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            D  EE++EAF+VFD D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.392e-15
Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 2
Query:    2 RKMADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445
            R +A++L++++I+  +E F   D    G IT  EL   +R  G    + E+ D++  A  D N TI + EF+      +   + EE L  AF  FD D +G+I+  +L+         + D  ++E+I E D + DGQI+Y EFV +M
Sbjct:  371 RVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFI-AATLPLNKIEREEHLLAAFTYFDKDGSGYITVDKLQRACGE--HNMEDSLLEEIISEVDQNNDGQIDYAEFVAMM 515          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.392e-15
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445
            M      D+I    + F   D D  G ++  E  + +  L QNP    +Q +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   11 MCSNFDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 7.042e-15
Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = 2
Query:   29 DQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 433
            D+I   ++ F   D+D  G I   E  ++   +  NP    + ++    DAD +G +DF EF+  ++        +E+L+ AF+++D D++GFIS  EL  V+     +NL ++   + VD  I E D DGDG++++EEF
Sbjct:   21 DEIERLRKRFMKLDRDSSGSIDKNEFMSIP-GVSSNPLAGRIMEVF---DADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLDDEQLQQIVDRTIVENDSDGDGRLSFEEF 156          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: MLRS_CHICK (Myosin regulatory light chain 2, skeletal muscle isoform OS=Gallus gallus GN=MYLPF PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 9.197e-15
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 2
Query:   32 QISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445
            QI EFKEAFT+ D++ DG I   +L     ++G+ N    EL  MI EA    +G I+F  FL +   K+K  D E+ +  AF+V D D  G I  + L  ++T   ++ T EE+  M      D  G ++Y+    V+
Sbjct:   25 QIQEFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 159          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CABP3_HUMAN (Calcium-binding protein 3 OS=Homo sapiens GN=CABP3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.197e-15
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 2
Query:  191 GTIDFPEFLNLMARKMKDTDSE----EELKEAFRVFDTDQNGFISTAELRHVMTNL-GEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 445
            G +DF +F+ LM  K+    +     +E+++AF+ FDT+ +G I+ AEL+  M  L GE+LT  E+ E++READV+GDG +++EEFVK+M
Sbjct:  101 GRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLAELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKMM 190          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.569e-14
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            M  ++ D    EFK+ +   D + DG ++  EL  +M     +  E E Q +I   D + +G + F EFL  M    K+   S +E+K+ F   D D NG IS  EL   +  +  KL +   +++I+EAD DGDG +N EEFV  ++AK
Sbjct:   12 MPKEVIDAMKQEFKDNY---DTNKDGTVSCAELAKLM-----DCPEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAK 153          

HSP 2 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   41 EFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV-FDTDQNGFISTAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 436
            E K+ F   DKDG+G I+  EL   +  +     E     +I EAD DG+G ++  EF++ +  K+         K+ F   FD + +G ++ AE+  ++  NL  + ++E ++EMI   D++GDG++ + EF+
Sbjct:   89 EIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAKLPLC-----FKKCFHEDFDKNGDGSLTNAEMSQLLNRNLPGQYSEELINEMISRVDLNGDGRVQFGEFL 217          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: LPS1A_LYTPI (Calcium-binding protein LPS1-alpha OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.569e-14
Identity = 43/138 (31.16%), Postives = 73/138 (52.90%), Query Frame = 2
Query:   41 EFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKM-------KDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 433
            E K+ F   DKDG+G I+  EL   +R +     +     +I EAD DG+G ++  EF + +  K+       KD +  E  K  F  FD + +G ++TAE+   M+    K +D+E++ +I   D++ DG++ + EF
Sbjct:   89 EIKQMFDDLDKDGNGRISPDELNKGVREIYTKVVDGMANKLIQEADKDGDGHVNMEEFFDTLVVKLPIGMGPCKDEEYREYYKNEFEKFDKNGDGSLTTAEMSEFMSK-STKYSDKEIEYLISRVDLNDDGRVQFNEF 225          

HSP 2 Score: 77.7962 bits (190), Expect = 3.495e-14
Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 2
Query:   26 DDQISEF-KEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADV-DGDGQINYEEFV 436
            D++  E+ K  F  FDK+GDG +TT E+   M S     ++ E++ +I+  D + +G + F EF   +     D  S++ +K+ F   D D+NG IS  E+   +T +  ++ D EV ++I+E+   D DG IN+ EFV
Sbjct:  163 DEEYREYYKNEFEKFDKNGDGSLTTAEMSEFM-SKSTKYSDKEIEYLISRVDLNDDGRVQFNEFFMHL-----DGVSKDHIKQQFMAIDKDKNGKISPEEMVFGITKIYRQMVDFEVAKLIKESSFEDDDGYINFNEFV 295          

HSP 3 Score: 75.485 bits (184), Expect = 1.734e-13
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 2
Query:   29 DQISEFKEAFT-LFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            D I   K+ F   +D + DG ++  EL  +M     N TE   Q++I   D + +G + F EF+  M    K+   S +E+K+ F   D D NG IS  EL   +  +  K+ D   +++I+EAD DGDG +N EEF   ++ K
Sbjct:   15 DAIEALKQEFKDNYDTNKDGTVSCAELVKLM-----NWTEEMAQNIIARLDVNSDGHMQFDEFILYMEGSTKERLYSSDEIKQMFDDLDKDGNGRISPDELNKGVREIYTKVVDGMANKLIQEADKDGDGHVNMEEFFDTLVVK 153          
The following BLAST results are available for this feature:
BLAST of CX293896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 476
Match NameE-valueIdentityDescription
CABP7_PAPAN4.128e-1544.44Calcium-binding protein 7 OS=Papio anubis GN=CABP7... [more]
CABP7_MOUSE4.128e-1544.44Calcium-binding protein 7 OS=Mus musculus GN=Cabp7... [more]
CABP7_HUMAN4.128e-1544.44Calcium-binding protein 7 OS=Homo sapiens GN=CABP7... [more]
CDPKB_ORYSJ5.392e-1532.43Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CANB1_DROME5.392e-1533.77Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CANB_YEAST7.042e-1532.14Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
MLRS_CHICK9.197e-1534.53Myosin regulatory light chain 2, skeletal muscle i... [more]
CABP3_HUMAN9.197e-1544.44Calcium-binding protein 3 OS=Homo sapiens GN=CABP3... [more]
LPS1B_LYTPI1.569e-1434.67Calcium-binding protein LPS1-beta (Fragment) OS=Ly... [more]
LPS1A_LYTPI1.569e-1431.16Calcium-binding protein LPS1-alpha OS=Lytechinus p... [more]

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Properties
Property NameValue
Genbank descriptionC05002C04SK FlavRip1 Citrus clementina cDNA clone C05002C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293896 ID=CX293896; Name=CX293896; organism=Citrus clementina; type=EST; length=526bp
AAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCACCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGA
GCTCCAGGACATGATCAATGAAGCGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACACGGATCAGAA
TGGTTTCATCTCAACTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCTCTTT
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