CX293939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21 Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRL-----AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA +++ N++EA + E+ ++ + G QR+AAY E ++AR+ +S LY L P++ RL AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 286 LLLQCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLP-NPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGL 430
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21 Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRL-----AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA +++ N++EA + E+ ++ + G QR+AAY E ++AR+ +S LY L P++ RL AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 294 LLLQCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLP-NPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGL 438
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDR----LAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA +++ N++EA + E+ ++ + G QR+AAY E ++AR+ +S LY L P + AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 295 LLLQCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGL 439
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDR----LAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA +++ N++EA + E+ ++ + G QR+AAY E ++AR+ +S LY L P + AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 295 LLLQCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGL 439
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.826e-20 Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRL-----AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA ++ N+++A + E+ ++ + G QR+AAY E ++AR+ +S LY L P ++ RL AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 302 LLLQCAEAVNADNLDDAHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPPGSPAAA-RLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGL 446
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19 Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPES 491 L+ CA + N++ A ++ ++ + Q +++A Y EGLA R +Y+ K SS +E CP KF AN AI+EAF+G+KRVH+IDF + QG Q+ L+Q +A PG P RLTG+ P + Sbjct: 218 LMACAEAVQQENLKLAEALVKQIGFLAVSQAGAMRKVATYFAEGLARR-------IYRLYPDKPLDSSFSDILQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIGPPST 355
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19 Identity = 54/150 (36.00%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQI------LFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 L+ CA + N A ++ ++ + S QG +++AAY E LA R+ + + PP S L A +E CP KF AN AI+EAF G +RVH++DF I QG Q+ L+Q +A PG P RLTGV P+ Sbjct: 247 LLACAEAVQQENFSAAEALVKQIPMLASSQGGAMRKVAAYFGEALARRV----------YRFRPPPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQ 386
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 54 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSS---DRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV 476 LL+ CA ++ N++EA ++ ++ ++ + G QR+AAY E ++AR+ S +Y + P S +A Q+ + P KF AN AI EAF+ E RVHIID DI QG Q+ L +AS PG P +RLTG+ Sbjct: 420 LLLQCAEAVAADNLDEANRMLLQVSELSTPYGTSAQRVAAYFSEAMSARLVNSCLGIYASAPLNALPLSLNQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPLVRLTGL 563
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQIL-----FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 L+ CA + N+ A ++ ++ + + QG +++AAY E LA R+ F ++ +P SS AA L +E CP KF AN AI+EAF G +RVH++DF I QG Q+ L+Q +A PG P RLTGV P+ Sbjct: 234 LLACAEAVQQENLSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRV-----FRFRP----QPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQ 373
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQIL-----FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 L+ CA + N+ A ++ ++ + + QG +++AAY E LA R+ F ++ +P SS AA L +E CP KF AN AI+EAF G +RVH++DF I QG Q+ L+Q +A PG P RLTGV P+ Sbjct: 238 LLACAEAVQQENLSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRV-----FRFRP----QPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQ 377 The following BLAST results are available for this feature:
BLAST of CX293939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293939 ID=CX293939; Name=CX293939; organism=Citrus clementina; type=EST; length=505bpback to top |