CX293939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.581e-18 Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 48 KQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAI--IEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 + +L+ CA +S + A +++ +RQ S GD +R+A Y L AR+A G +Y AL K+ +SD L A Q VCP K + AN +I + + K +HIIDF I+ G Q+ +LI +A G+ LR+TG++ P+ Sbjct: 319 RTMLVSCAQAVSINDRRTADELLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSIMRLASSANAKTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQ 467
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 7.977e-18 Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 48 KQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIA-SLPGNRPHLRLTGVDDPE 488 + LL+ CA +S + A ++ ++R+ S G+ +R+A Y L AR+A +G +Y AL K+ ++D L A Q VCP K + AN +++ +HIIDF I+ G Q+ LI ++ S PG P LR+TG++ P+ Sbjct: 394 RTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQ 541
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.977e-18 Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILF-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 485 L+ CA + N+ A ++ ++ + Q +++A Y E LA R +Y+ + P +Q+ F E CP KF AN AI+EAF+G+KRVH+IDF ++QG Q+ L+Q +A PG P RLTG+ P Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR-------IYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPP 309
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.042e-17 Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 L+ CA + N A ++ ++ + + QG +++AAY E LA R+ +F + +D L A +E CP KF AN AI+EAF G RVH++DF I QG Q+ L+Q +A PG P RLTGV P+ Sbjct: 245 LLACAEAVQQENFAAAEALVKQIPTLAASQGGAMRKVAAYFGEALARRVY---RFRPADSTLLDAAFADLLHAH--FYESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQ 383
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.042e-17 Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQIL--FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 485 L+ CA + N+ A ++ + + Q +++A + E LA R +Y+ C E P + M + +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ LIQ +A P P RLTG+ P Sbjct: 215 LMVCAEAVQQNNLNLAEALVKRIDYLAVSQAGAMRKVATFFAEALARR-------IYRL--CPENPLDRSVLDMLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPP 350
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 485 L+ CA + N+ A ++ ++ + Q +++A Y E LA R+ + C SD L +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A G P RLTG+ P Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHCL----SDTL--QMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPP 361
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILF-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 485 L+ CA + N+ A ++ ++ + Q +++A Y E LA R +Y+ + +Q+ F E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A G P RLTG+ P Sbjct: 212 LMACAEAVQSSNLTLAEALVKQIGFLAVSQAGAMRKVATYFAEALARR-------IYRLSPPQTQIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPP 348
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16 Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALK--CKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 488 L+ CA + N++ A ++ + + S Q +++A Y E LA R +Y+ +P +D+L +E CP KF AN AI+EAF RVH+IDF + QG Q+ L+Q +A PG P RLTG+ P+ Sbjct: 175 LMACAEAVQQDNLKLADALVKHIGLLASSQTGAMRKVATYFAEALARR-------IYRIFPPDSLDPSYNDKLQIP--FYETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQ 311
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16 Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQIL--FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 485 L+ CA + N+ A + + + Q +++A + E LA R +Y+ C E P ++ M L +E P KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A P P RLTG+ P Sbjct: 222 LMACAEAVQQNNLNLAEALEKRIGYLAVSQAGAMRKVATFFAEALARR-------IYRV--CPENPLDHSMSDMLQLHFYESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPP 357
BLAST of CX293939 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16 Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 57 LIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRP-HLRLTGVDDP 485 + DCA +SD + EA+ + ++R+ VS GDP +R+A Y E L+ R++ + A + D + + + L + CP KF + AN AI+EA + ++HI+DF I QG Q+ L+Q +A+ +P +R++G+ P Sbjct: 221 IYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSP----ATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAP 359 The following BLAST results are available for this feature:
BLAST of CX293939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293939 ID=CX293939; Name=CX293939; organism=Citrus clementina; type=EST; length=505bpback to top |