CX293958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAIV 432 G++ ++ GL TV AD++GAK II + G KG L R+P A + D+VM +V+KG P++RK+ AVIVRQR P+RR DG ++ FEDNA VIVNP G G+ I GPI KE A+ WP++AS A ++ Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPKVASIATMVI 141
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G GS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 66/134 (49.25%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 37 SAGNKFRMSL--GLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAIV 432 ++ NK R + GL V + V D++GAK II V G GRL R+P A VGDMV+ TVKKG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G GS I GP+ +E + WPRI + A+ +V Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGNVASIVV 137
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.496e-29 Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G GS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.496e-29 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L II+VKG KG RLP+ VG +V +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G GS I GP+ KE A+ W ++ A I Sbjct: 12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29 Identity = 61/120 (50.83%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G GS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 61/115 (53.04%), Postives = 83/115 (72.17%), Query Frame = 1 Query: 88 VNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAIV 432 VN +D++GAK IISV G +G L R+P A VGD+VM +V+KG PD+RK+ AV++RQR P+RR DG ++ F+DNA VIVNP G G+ I GP+ +E A+ WP++AS A IV Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 61/120 (50.83%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G GS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.266e-28 Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAIV 432 G++ ++ L + VN AD++G K II V G +G L R+P A + DMVM ++KKG P++RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G G+ + GPI +E A+ WP+IAS A +V Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138
BLAST of CX293958 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.266e-28 Identity = 65/121 (53.72%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNGSAITGPIGKECADLWPRIASAANAIV 432 LP A + CAD+TGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V AVIVRQRK +RR DG + FEDNA VI N +GE GS I G + +E A+ + +I + A+ IV Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVIV 132 The following BLAST results are available for this feature:
BLAST of CX293958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 279
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293958 ID=CX293958; Name=CX293958; organism=Citrus clementina; type=EST; length=556bpback to top |