CX293967

Overview
NameCX293967
Unique NameCX293967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length500
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX293967 vs. ExPASy Swiss-Prot
Match: PSBI_LEPTE (Photosystem II reaction center protein I OS=Leptosira terrestris GN=psbI PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.109e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 
Query:  160 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR 261
            MLTLK+FVYTVV FFVSLF+FGFLSNDPGRNP R
Sbjct:    1 MLTLKIFVYTVVTFFVSLFVFGFLSNDPGRNPSR 34
The following BLAST results are available for this feature:
BLAST of CX293967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PSBI_LEPTE7.109e-1188.24Photosystem II reaction center protein I OS=Leptos... [more]

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Properties
Property NameValue
Genbank descriptionC05004B11SK FlavRip1 Citrus clementina cDNA clone C05004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293967 ID=CX293967; Name=CX293967; organism=Citrus clementina; type=EST; length=500bp
AATTGTGTGAATTTAATTTATGAAAACGATTTTCTATTTAGAGAATCAAA
TTCTAAAAAGAACTTCATTTCTTGATGTCAAAATTGGATATGTAGTATAA
AAATAGAGAATCTATTCTCTTTTTCCTTTTCCCCAAAAACCTGATTTGGA
GATTGTGTAATGCTTACTCTCAAACTCTTTGTTTACACCGTAGTGATATT
CTTTGTTTCGCTCTTCATCTTCGGATTCCTGTCTAATGATCCAGGGCGTA
ATCCCGGACGCGAAGAATAAAAAAGGAAGGAGTTGCTTACTTTATTCGTA
TAAACGTTCTTAGGATTTTTTGATTCCCAGTTACTATTAAAAATAAAGTA
AAAGTGTTCGCTAAAGGTAAATTTGAAAAATACCAAGCCATCGCCCGAAA
CGGAAAGAGAGGGATTCGAACCCTCGGTACGAATAACTCGTACACCGGAT
TAGCAATCCGACGCTTTAATCCACTCAGCCATCTCTCCTAATTGAAATAA
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