CX293984

Overview
NameCX293984
Unique NameCX293984
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length353
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX293984 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.443e-11
Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 3 
Query:   42 FSRGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSTRRGHVTADVPQPGTPAYIV 347
            F     +GPL  E +R +KF++ DA +  + +HRG  Q++   + +     L A P L EP+Y VEI TP D   A+ T+L ++RG        PG    ++
Sbjct:  675 FRAAVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLLQPVKNLCKGLLLAAGPILYEPIYEVEITTPNDYSGAVTTILLSKRGTAEDFKTLPGNDTTMI 776
The following BLAST results are available for this feature:
BLAST of CX293984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EF2_ENCCU4.443e-1133.33Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]

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Properties
Property NameValue
Genbank descriptionC05004D08SK FlavRip1 Citrus clementina cDNA clone C05004D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293984 ID=CX293984; Name=CX293984; organism=Citrus clementina; type=EST; length=353bp
GAGCTTGCTGAATGCTGTTAAGGATTCCATTGTTCAAGGATTTCAGTAGG
GGCGCTCGAGAAGGACCCCTCTGTGATGAACCTATCAGAAATGTCAAGTT
TAAAATAGTCGATGCAAGGATTGCACCTGAACCGCTGCATCGAGGATCTG
GACAGATCATTCCCACAGCTCGACGTGTGGCTTATTCAGCTTTTCTTATG
GCTACCCCTCGGCTTATGGAACCGGTGTATTATGTTGAGATACAAACTCC
AATTGATTGTGTCTCTGCAATCTACACGGTGTTATCTACAAGGCGTGGAC
ATGTCACTGCCGATGTTCCTCAGCCAGGAACTCCAGCTTATATTGTTAAG
GCA
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