CX293999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.546e-24 Identity = 63/147 (42.86%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 94 SILDPFSFDVWNPFKDF-AFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVERE---DKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 522 ++LDP S D W F A SL+ R P + N R+DWKETP AHVF DL G+ K+ K+++ED VL I+ +R E + +E WH VERS GKF RRFRLP ++DQV AS+++G AI ISG Sbjct: 8 NVLDPMSVDFWADADPFGAVRSLAERCP----VLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 52/134 (38.81%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 52 KMAMIPSFFGSQHDSILDPFSFDVWNPFKDFAFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 K +++P F S + + D +S +PF+ + + + R+DWKETPE HV VD+ GL K+D+K+++E++RVL+++ +R E + K + WHRVERS GKF R+F+LP+N +D V+A +E+G Sbjct: 27 KASLLP-FIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENG 159
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 45/89 (50.56%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 187 AIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 A+ R+DWKETPE HV +D+ GL +E++K+++E++RVL+++ +R E E K + WHRVERS GKF R+FRLP+N +D V+A +E+G Sbjct: 63 AMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENG 151
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.078e-21 Identity = 50/121 (41.32%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 97 ILDPFSFDVWNPFKDFAFPSLSSRF-PRETSAIVNTRMDWKETPEAHVFKVDL-AGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 + D +FD WNPF F + + +TSA NT ++ +ET EA+VF+ DL AG+ KE+V++++++ VL IT +R+V RE+K + H +ERS F RF LP++ +D VRAS++ G Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGG 126
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 100 LDPFSFDVWNPFKDF----AFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 ++P S D+ PF D AF + S MDWKET AHVF D+ G+ +E+V++++E+++VL+I+ R E+K E WHRVERS +F+R RLP N D V A++++G Sbjct: 33 IEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNG 154
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.768e-20 Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 118 DVW-----NPFKDFAFPSLSSRFP----RETS-AIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 D+W +PFK + R P R+TS A+ R+DWKET E H +D+ GL K++VK+++E++ VL+++ +R E E K + WHRVERS GKF R+F+LP+N ++ V+A +E+G Sbjct: 40 DLWLDRFPDPFK------ILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENG 155
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 301 VLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 522 +LQI+ +RNVE+EDKN+TWHRVERS GKF+R FRLP+N K+DQV+AS+E+G AIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17 Identity = 41/100 (41.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 169 FPRETSAIVN-TRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADR----NVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 F R+ A+++ R+DW+ET +AH VD+ G+ KED+++++ED+RVL+I+ +R E++ + WHR ERS G+F R+ RLP+N +D + AS+++G Sbjct: 65 FDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNG 164
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 58 AMIPSFFGSQHDSILDPFSFDVWNPFKDFAFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIED-DRVLQITADR-------NVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 A++P +G D DPF +P + A ++ E +A+ R DWKETPEAHV VD+ G+ + DV++++++ RVL+++ +R E E WHR ER+ G+F RRFR+P + +V A ++DG Sbjct: 29 ALVPYGYGYMLD---DPFRVLEQSPLRP-AGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDG 164
BLAST of CX293999 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.004e-15 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 160 SSRFPRETSAIVNTRMDWKETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 453 S + R+ A+ T D KE P ++VF VD+ GL D+K+Q+E+D VL I+ +R E E + + R+ER GKF+R+F LPEN D + A +DG Sbjct: 33 SKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDG 130 The following BLAST results are available for this feature:
BLAST of CX293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293999 ID=CX293999; Name=CX293999; organism=Citrus clementina; type=EST; length=571bpback to top |