CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.744e-30
Identity = 61/175 (34.86%), Postives = 106/175 (60.57%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            N+ VA  +T+  ++ W +  L+ +P   KK++ EI  ++G +   + E D  +L YL+AV+KET+RL+  +PLL+P   +    + GY IPA++++ VNAW +  +P  W++P+ F PERF+  +S ++  G  F  IPFG GRR CPG+ + +  + + +  ++  F+   P G
Sbjct:  302 NINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPG 475          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.362e-29
Identity = 63/168 (37.50%), Postives = 98/168 (58.33%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQH-FELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            AG DT+A  + W M  L+K P   +++  EI+S++G     V E+DV+++ YLKAVV E +R  P    L+P    +  V+ GY +P    +      IGRDP  WE P  F PERF+  +  +D  G    +++PFGAGRRICPG+ + +  ++  +AN++ +F W+
Sbjct:  306 AGTDTTATALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWK 473          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 59/175 (33.71%), Postives = 105/175 (60.00%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            N+ VA  +T+  ++ W +  L+ +     K++ E+  ++G     V E D+++L YL+AV+KET+RL+  +PLL+P   +    + G+ IPA++++ VNAW +  +P  W+ PEEF PERF+  ++ ++  G  F  +PFG GRR CPG+ + +  + + +  L+  F+   P G
Sbjct:  302 NINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQ-VTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG 475          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2U1_HUMAN (Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 8.828e-29
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE---LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F+AG DT+  +++W + Y+  NP   +KV  EI  +IG N+     D  Q + Y +A + E  RL   VPL IP  T +  V+ GY IP  T +  N W++ RDP  WE PE+FYP RF+D     +GQ  +    IPFG G+R+C G  +    + L   +L+  F + +P
Sbjct:  348 DLFIAGTDTTTNSLLWCLLYMSLNPDVQEKVHEEIERVIGANRAPSLTDKAQ-MPYTEATIMEVQRLTVVVPLAIPHMTSENTVLQGYTIPKGTLILPNLWSVHRDPAIWEKPEDFYPNRFLDD----QGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFAFALP 516          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2U1_RAT (Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.568e-28
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE---LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            ++F+AG DT+  +++W + Y+  NP   KKV  EI  +IG ++     D  Q + Y +A + E  RL   VPL IP  T +K V+ GY+IP  T V  N W+I RDP  WE P++F P RF+D     +GQ  +    IPFG G+R+C G  +    + L   +L+  F + +P G
Sbjct:  334 DLFIAGTDTTTNSLLWCLLYMSLNPGVQKKVHEEIERVIGRDRAPSLTDKAQ-MPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGYSIPKGTVVLPNLWSIHRDPVIWEKPDDFCPHRFLDD----QGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFALPEG 504          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.355e-28
Identity = 60/175 (34.29%), Postives = 104/175 (59.43%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            N+ VA  +T+  ++ W +  L+ +     KV+ E+  ++G     V E D+ +L YL+AV+KET+RL+  +PLL+P   +    ++G+ IPA++++ VNAW +  +P  W+ PEEF PERF+  +S ++  G  F  +PFG GRR CPG+ + +  + + +  L+   +   P G
Sbjct:  303 NINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQ-VTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPG 476          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.355e-28
Identity = 64/166 (38.55%), Postives = 103/166 (62.05%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            + + G DTSA T+ W M  L+ N   +K+++ EI S++G  +  + E D+ +L YL++VVKE +RL P +PL++ R   + C + G+ I  KT + VNA+A+ RDP  WE+P+EF PERF+    + + +  + I FG+GRR CPG N+    +  A+  ++  FD
Sbjct:  305 LLLGGTDTSAQTIQWTMAELINNRNVLKRLREEIDSVVGETR-LIQEKDLPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQ--EEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFD 466          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 4.381e-28
Identity = 64/176 (36.36%), Postives = 98/176 (55.68%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE---LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            ++F+AG DT+  +++W + Y+  NP   KKV  EI  +IG ++     D  Q + Y +A + E  RL   VPL IP  T +K V+ G+ IP  T V +N W++ RDP  WE P++F P RF+D     +GQ  +    IPFG G+R+C G  +    + L   +L+  F + +P G
Sbjct:  334 DLFIAGTDTTTNSLLWCLLYMSLNPDVQKKVHEEIERVIGCDRAPSLTDKAQ-MPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFLDD----QGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEG 504          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.840e-27
Identity = 60/174 (34.48%), Postives = 97/174 (55.75%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE---LIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F+AG DT+  +++W + Y+  +P   +K+  EI  +IG ++     D  Q + Y +A + E  RL   VPL IP  T +K V+ G+ IP  T +  N W++ RDP  WE P +FYP+RF+D     +GQ  +    IPFG G+R+C G  +    + L   +L+  F + +P
Sbjct:  348 DLFIAGTDTTTNSLLWCLLYMSLHPNIQEKIHEEIARVIGADRAPSLTDKAQ-MPYTEATIMEVQRLSTVVPLSIPHMTSEKTVLQGFTIPKGTIILPNLWSVHRDPAIWEKPNDFYPDRFLDD----QGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLP 516          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.844e-27
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKG-QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIR 527
            G DT+A  + WA+  L++NP    ++  EI+  +G NK  ++E D++++ YL AVVKE +R  P   + +     +   + GY IP    V +    I  DP  W  PE+F P+RF       D  G    ++IPFG GRRICPGLNM    V L LA L+ +F+W  P   R
Sbjct:  316 GTDTTATAIEWAIGRLIENPNIQSQLYEEIKKTVGENK--IDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTR 486          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TCMO_RUTGR2.744e-3034.86Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C89A2_ARATH1.362e-2937.50Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PEA2.323e-2933.71Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
CP2U1_HUMAN8.828e-2936.78Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1... [more]
CP2U1_RAT2.568e-2837.50Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1... [more]
TCMO_MEDSA3.355e-2834.29Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75AK_ARATH3.355e-2838.55Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
CP2U1_MOUSE4.381e-2836.36Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]
CP2U1_BOVIN2.840e-2734.48Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]
C77A2_SOLME4.844e-2737.57Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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