CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHF-----ELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            ++F AG +T+   + W + +L+ NP   KK+Q EI   +G ++     +D   L  L+A ++E +R++P  P+LIP +      I  + +P  T V VN WA+  D   W+ P++F PERF+D      G H        +PFGAG R C G  +    + +  A LL +FD ++
Sbjct:  297 DIFGAGIETTTTVLKWILAFLVHNPEVKKKIQKEIDQYVGFSRT-PTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEWDQPDQFMPERFLDP----TGSHLITPTQSYLPFGAGPRSCIGEALARQELFVFTALLLQRFDLDV 466          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 51/169 (30.18%), Postives = 87/169 (51.48%), Query Frame = 3
Query:   12 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSC--IDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            +A  D  +  V WA+  ++  P  + K   EI  ++G  + FV E D+ +L+Y+KA+++E  RL P     +P   +    + GY IP  ++V ++ + +GR+P+ W +P  F PER ++ C  +         I F  G+R C    +G A   + LA LL  F W++
Sbjct:  337 MAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKER-FVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL 504          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.453e-23
Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            ++F AG DT    + W++ YL+  PR  +K+Q E+ +++G  +      D  +L YL+AV+ ET R    +P  IP  T +   + G+ IP    VFVN W    DPE W +PE F PERF+     +D K    +++ FG G+R C G  +G   V L LA LL + ++ +  G
Sbjct:  317 DLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARR-PRFSDRPQLPYLEAVIMETFRHTSFLPFTIPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEAFRPERFLTPSGAVD-KALTEKVLLFGLGKRKCIGETIGRLEVFLFLATLLQQVEFSVSPG 489          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.613e-22
Identity = 56/172 (32.56%), Postives = 93/172 (54.07%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSC-IDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F AG +T+ + V W + +L+ NP+  KK+  EI   +G ++      D   L  L+A ++E +RL+P  P+LIP +      I  +A+   T+V +N WA+  + + W  P++F PERF++             +PFGAG R C G  +    + L +A LL +FD E+P
Sbjct:  298 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT-PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 468          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.613e-22
Identity = 66/198 (33.33%), Postives = 102/198 (51.52%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI--------DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKG-------------------QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            + +AG +T+AA + WA+  L +NP  MKK Q E+  ++G   G    + ++EL Y++ +V E +RL P  PLLI R +++  V+        DGYAIPA T VF++ + + R P  W+ P++F PERF+  +   + +G                     F  +PFG G R C G    +    +AL  LL  FD E+
Sbjct:  350 MLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLG--TGRPTFESLKELQYIRLIVVEALRLYPQPPLLI-RRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVEL 544          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP17A_PIG (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus scrofa GN=CYP17A1 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F AG +TSA+ V W + +L+  P   KK+Q  I   IG N+   +  D  +L  L+A ++E +R +P  P LIP   I    I  + I   T V VN WA+  + + W  P+ F PERF+D +           +PFGAG R C G  +    + L  A LL +FD E+P
Sbjct:  298 DIFGAGVETSASVVKWIVAFLLHYPLLRKKIQDAIDQNIGFNRA-PSISDRNQLVLLEATIREVLRFRPVSPTLIPHRAIIDSSIGEFTIDKDTDVVVNLWALHHNEKEWHRPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFTAGLLQRFDLELP 468          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22
Identity = 56/172 (32.56%), Postives = 92/172 (53.49%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSC-IDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F AG +T+ + V W + +L+ NP+  KK+  EI   +G ++      D   L  L+A ++E +RL+P  P+LIP +      I  +A+   T V +N WA+  + + W  P++F PERF++             +PFGAG R C G  +    + L +A LL +FD E+P
Sbjct:  298 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT-PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 468          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP1A2_FELCA (Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22
Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIR 527
            ++F AG DT    + W++ YL+ NP   +K+Q E+ +++G  +     D +Q L YL+A + E  R    +P  +P  T +   ++G+ IP K  VF+N W +  D + W +P EF PERF+  D     K    +++ FG G+R C G  +    V L LA LL + ++ +P G++
Sbjct:  309 DIFGAGFDTVTTAISWSLMYLVTNPEKQRKIQEELDTVVGRARRPRLSDRLQ-LPYLEASILEIFRHSSFIPFTVPHSTTRDTTLNGFYIPEKHLVFINQWQVNHDQKVWGDPFEFRPERFLTADGTAINKILSEKVMIFGLGKRRCIGEVLAKWEVFLFLAILLQQLEFSVPAGVK 484          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.592e-22
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQH-FELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            G DT+AA + W++  L  NP   KKV  E+  + G +      +D+++L YL+ V+KET+RL P+VP L  R   + C + GY +   T   +  +A+ RDP  + NPEEF PERF     + +G+H +  +PF AG R C G    +      L+ +L  F
Sbjct:  330 GHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVP-LFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPE--NAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF 488          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP1A1_FELCA (Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.692e-22
Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIR 527
            ++F AG DT    + W + YL+ +P   +K+Q E+ ++IG  +     D +Q L Y++A + E  R    VP  IP  T +   + G+ IP +  VFVN W I  D + W +P EF PERF+  D  I+ K    ++I FG G+R C G  +    V L LA LL + ++ +P G +
Sbjct:  318 DLFGAGFDTVTTAISWCLMYLVTSPNVQEKIQKELDTVIGRERQPRLSDRLQ-LPYMEAFILEMFRHTSFVPFTIPHSTTKDTSLSGFYIPKERCVFVNQWQINHDQKLWGDPSEFRPERFLTPDGTIN-KALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPQGTK 492          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP17A_RAT7.238e-2332.57Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
C79B3_ARATH7.238e-2330.18Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
CP1A1_RABIT9.453e-2335.43Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
CP17A_PANTR1.613e-2232.56Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
C97B2_SOYBN1.613e-2233.33Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
CP17A_PIG2.106e-2235.47Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus sc... [more]
CP17A_HUMAN2.106e-2232.56Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
CP1A2_FELCA2.751e-2232.77Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 ... [more]
CP4V2_HUMAN3.592e-2235.80Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP1A1_FELCA4.692e-2235.03Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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