CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.462e-15
Identity = 49/179 (27.37%), Postives = 96/179 (53.63%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF---VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIRAM 533
            +  +G +T + T + A+ YL  +P+A+++++ E    I   K     ++ +D + + + +AV+ ET+RL   V  ++ R+T Q   ++GY IP   R++V    +  DP  + +P  F P R++++ +D +      + FG G R+CPG  +G+A +   L   + ++ WE   G + M
Sbjct:  276 IMYSGFETVSTTSMMAVKYLHDHPKALEEIRKE-HFAIREKKSLEDPIDYNDFKAMRFTRAVIYETLRLATIVNGVL-RKTTQDMELNGYMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENNLDHQSS---FLMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNKLM 449          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP6D3_MUSDO (Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 3
Query:    9 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN----KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQ--KCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            ++AG++T+A++  + +  L  NP A+KK Q E+   +  +     G +  + +Q++ YL   VKET R  P +P L  R+  Q  K     + I   T V ++   + RD + +  P  + PERF D   D+    +  +PFG G R C    MG+    +ALA +L  F+ E
Sbjct:  316 YIAGSETTASSTSFTIYELAMNPEALKKAQNEVDECLKKHGIKPDGRITYEAIQDMKYLDLCVKETTRKYPGLPFL-NRQCTQDFKVPNSKFTIKKDTNVIISLLGLHRDAKYFPEPLAYKPERFADETKDYDAAAY--MPFGEGPRHCIAQRMGVMNTKVALAKILANFNIE 485          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI--DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            AG DT+++ + W +  L K P   ++ + EIR L+G     +  + + ++ Y    +KE +RL    P++     + K +   DG ++PA   VF+N WA+  +P  WE+P+ F P RF     + K   +  IPF AG R C G +  I    +A+A  L +F
Sbjct:  314 AGHDTTSSAISWILYCLAKYPEHQQRCRDEIRELLGDGSS-ITWEHLSQMPYTTMCIKECLRLY--APVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQVFNPLRFSRENSE-KIHPYAFIPFSAGLRNCIGQHFAIIECKVAVALTLLRF 473          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL--YKF 500
            G DT +A + W +  L  +P   ++   E++ +  G+       D+  ++YL+ V+KE++RL P+V +   RE  Q   + GY IPA T +  +   I R+PE + NP  F P+ F+   +      +  IPF AG R C G    +    + L+ LL  Y+F
Sbjct:  310 GHDTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNNMNYLERVIKESLRLHPSV-IYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNFLPDRV-VNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRF 470          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            AG +T+++ +      L  +P   +K+Q EI +    NK     D + ++ YL  VV ET+RL P +   + R   +   I G  +P  T V V  + + RDP+ W  PEEF PERF     D     +  +PFG G R C G+   +  + LAL  +L  F ++
Sbjct:  305 AGYETTSSALSLLAYELATHPDVQQKLQEEIEATFP-NKAPPTYDALAQMEYLDMVVNETLRLYP-IAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINP-YTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2H2_CHICK (Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 50/166 (30.12%), Postives = 89/166 (53.61%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F+AG  T++ T+ + +  L+K+P   +K+  EI  ++G ++     D  Q L Y  AV+ E  R    +P+ +PR  I+   +  Y IP  T +F     I +D + + NPE+F P  F+++   F+  ++  +PF AG+RIC G  +    + L L ++L  F
Sbjct:  294 DLFLAGTGTTSTTLRYGLLILLKHPEIEEKMHKEIDRVVGRDRSPCMADRSQ-LPYTDAVIHEIQRFIDFLPVNLPRAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRKSNY-FMPFSAGKRICAGEGLARMELFLFLTSILQNF 457          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2F2_RAT (Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            N+   G +T   T+  A   LMK P+   +VQ EI  ++G ++    ED    + Y  AV+ E  R    +P+ +P   I+     G+ IP  T V      +  D + ++ P+EF PE F+D+   FK +    +PF AGRR+C G  +    + + L ++L  F
Sbjct:  294 NLLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDCVVGRSRMPTLEDRAS-MPYTDAVIHEVQRFADVIPMNLPHRVIRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGEPLARMELFIYLTSILQNF 457          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 51/167 (30.54%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            ++F AG +T++ T+ + +  LMK P   +K+  EI  +IG ++      D QE+ Y+ AVV E  R    VP  +P E  +  +  GY IP  T +     ++    + + +PE+F PE  +D    FK   +   PF AG+R+C G  +    + L L+ +L  F+
Sbjct:  251 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMPYMHAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHLVDESGKFKYSDY-FKPFSAGKRVCAGEGLARMELFLLLSAILQHFN 415          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 50/172 (29.07%), Postives = 82/172 (47.67%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPL 518
            ++F AG +T++ T+ +    ++K P   ++V  EI  +IG ++      D  ++ Y +AV+ E  R    +P+ +P    Q     GY IP  T VF+       DP  +E P+ F P+ F+D+    K      IPF  G+RIC G  +  A + L    +L  F    P+
Sbjct:  294 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP-PELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPV 463          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2A2_RAT (Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.909e-15
Identity = 50/170 (29.41%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            AG  + ++T+      LMK+P    KV  EI  +IG N+    ED ++ + Y +AV+ E  R     PL IPR  I+     G+ +P  T VF    ++  +P+ + N ++F P+ F+D     K ++   +PF  G+R C G ++    + L L  +L  F ++ P+ +
Sbjct:  299 AGTGSVSSTLYHGFLLLMKHPDVEAKVHEEIERVIGRNRQPQYEDHMK-MPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNHKDFNPQHFLDDKGQLK-KNAAFLPFSIGKRFCLGDSLAKMELFLLLTTILQNFRFKFPMNL 466          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C85A3_SOLLC1.462e-1527.37Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
CP6D3_MUSDO1.909e-1530.64Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 P... [more]
CP4Z1_HUMAN1.909e-1531.10Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4CU_BLAGE1.909e-1530.67Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP3AT_PIG1.909e-1532.12Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP2H2_CHICK1.909e-1530.12Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=... [more]
CP2F2_RAT1.909e-1530.12Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2... [more]
CP2E1_MACFA1.909e-1530.54Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]
CP2B6_HUMAN1.909e-1529.07Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]
CP2A2_RAT1.909e-1529.41Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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