CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2M1_ONCMY (Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2m1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15
Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F AG +T+++T+  +   ++K P   + VQ EI  +IG     V  DD  ++ Y  AV+ E  R     P  +P + ++      Y IP  T V     ++  DP+ ++NP+EF PE F+D    FK ++     FG G+R CPG  +    + L   ++L +F
Sbjct:  300 SLFAAGTETTSSTLRQSFLMMIKYPHIQESVQKEIDEVIGSRVPTV--DDRVKMPYTDAVIHEVQRYMDLSPTSVPHKVMRDTEFYNYHIPEGTMVLPLLSSVLVDPKLFKNPDEFDPENFLDENGVFK-KNDGFFAFGVGKRACPGEALARVELFLFFTSVLQRF 462          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2CP_MESAU (Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CYP2C25 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15
Identity = 49/166 (29.52%), Postives = 83/166 (50.00%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F AG +T++ T+ +A+  L+K+P    KVQ EI  ++G ++    +D    + Y  A++ E  R    +P+ +P           Y IP  T V  +  ++  D + + NPE F P  F+D   +FK   +  +PF AG+RIC G  +    + L L  +L  F
Sbjct:  293 DLFGAGTETTSTTLRYALLLLLKHPHVTAKVQEEIDQVVGRHRKPCMQDR-SHMPYTDAMIHEVQRFIDLIPISLPHAVTCDIKFRDYFIPKGTTVITSLSSVLHDNKEFPNPEVFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNF 456          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2B4_RABIT (Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CYP2B4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15
Identity = 50/172 (29.07%), Postives = 82/172 (47.67%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPL 518
            ++F AG +T++ T+ +    ++K P   ++VQ EI  +IG ++     DD  ++ Y  AV+ E  RL   +P  +P    +     GY IP  T VF    +   DP  +E P  F P  F+D+    K ++   +PF  G+RIC G  +    + L    +L  F    P+
Sbjct:  294 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL-DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPV 463          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP237_MOUSE (Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            ++F AG +T++ T+ +A+  L+K P    KVQ EI  +IG ++    +D    + Y  A++ E  R    +P  +P E         Y IP  T V  +  ++  D   + NPE F P  F+D    FK   +  +PF  G+RIC G  +    + L L ++L  F+
Sbjct:  293 DLFSAGTETTSTTLRYALLLLLKYPHVTAKVQKEIEHVIGKHRSPCMQDR-SRMPYTDAMIHEVQRFIDLIPNSLPHEVTCDIKFRNYFIPKGTTVITSLSSVLHDSTEFPNPEVFDPGHFLDGNGKFKKSDY-FMPFSTGKRICAGEGLARMELFLFLTSILQSFN 457          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C513C_DICDI (Probable cytochrome P450 513C1 OS=Dictyostelium discoideum GN=cyp513c1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15
Identity = 52/175 (29.71%), Postives = 81/175 (46.29%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            +V +AG DT   T+ +A+  L+ N    +K+   I  S+  G+  +        + YL  VVKE  R+ P   L +P  T + C I G+ I   T++  N ++  R    W NP  F PER I + +       + + F  G R C G+++  A V  A+A L   F +  P  I
Sbjct:  302 DVLIAGTDTVGQTLSFAIVALVNNAEIQEKLSRNIIDSMEKGDNHYSYSKYRNGIPYLALVVKEVFRMYPAGILGLPHMTSEDCEIQGHKIAKGTQIIQNIYSTHRSESFWPNPNNFIPERHIQNDVS------KSVHFAVGTRNCMGMSLSEAEVHTAMAELFGNFKFTNPSNI 470          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 54/167 (32.34%), Postives = 84/167 (50.30%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKG--QHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            AG +T+++ + + +  L  +P   KK+Q EI   +  NK     D V  + YL  V+ ET+RL P    L  R   +   I+G  IP  + V + ++ +  DP+ W  PEEF PERF     + KG    +  +PFG G R C G+   +  + LAL  +L  F ++
Sbjct:  306 AGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALP-NKAPPTYDTVMAMEYLDMVLNETLRLYPITNRL-QRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPEEFQPERFSK---ENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2C4_RABIT (Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CYP2C4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F AG +T++ T+ +++  L+K+P    +VQ EI  +IG ++    +D    + Y  AV+ E  R    +P  +P    +      Y IP  T +  +  ++  D +A+ NP+ F P  F+D   +FK   +  +PF AG+R+C G  +    + L L ++L  F
Sbjct:  290 DLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SHMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVKFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF 453          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP27B_RAT (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27b1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 53/170 (31.18%), Postives = 83/170 (48.82%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIG-GNKGFVNEDDVQELHYLKAVVKETMRLQPTVP--LLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQH-FELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            + +AG DT + T+ WA+  L ++P     +  EI   +  G+   +    + +L  LKAV+KE +RL P VP    +P   I    +  Y IP  T V +  +A  RDP  +  P  F P R++    +    H F  +PFG G+R C G  +    + +ALA +L  F+
Sbjct:  307 LLLAGVDTVSNTLSWALYELSRHPEVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVPGNSRVPDRDI---CVGNYVIPQDTLVSLCHYATSRDPAQFREPNSFNPARWLG---EGPAPHPFASLPFGFGKRSCIGRRLAELELQMALAQILTHFE 470          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF-VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            G DT+++ + +    +   P   +K   EI S++G +    V  D +  L+Y+   +KET+R+ P+VPLL  R+ +Q+C I+G  IPA T + ++   +GR  +    P  F PERF       K      IPF AG R C G    +  +    AN+L  ++ E
Sbjct:  318 GHDTTSSGITFFFYNIALYPECQRKCVEEIVSVLGKDTETPVTYDLLNNLNYMDLCIKETLRMYPSVPLL-GRKVLQECEINGKIIPAGTNIGISPLFLGRSEDISSEPNTFKPERFDVVTSAEKLNPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIE 481          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 48/164 (29.27%), Postives = 86/164 (52.44%), Query Frame = 3
Query:   12 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQH-FELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            +AG D+  A V + +  L +NP    +  LE+ ++   +       D+ E+ Y++  +KE +RL P+VP LI R+  ++  +  + +PA + VF+  +A  R    + +PE+F PERF  S  + + +H +  +PF AG R C G    I  +   ++ LL  +
Sbjct:  311 LAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVP-LIARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERF--SPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSY 471          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2M1_ONCMY3.257e-1530.12Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2CP_MESAU3.257e-1529.52Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CY... [more]
CP2B4_RABIT3.257e-1529.07Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CY... [more]
CP237_MOUSE3.257e-1529.94Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE... [more]
C513C_DICDI3.257e-1529.71Probable cytochrome P450 513C1 OS=Dictyostelium di... [more]
CP3AG_MOUSE4.253e-1532.34Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP2C4_RABIT4.253e-1528.31Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CY... [more]
CP27B_RAT4.253e-1531.1825-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
C4D10_DROMT4.253e-1531.52Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
C4AA1_DROME4.253e-1529.27Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
back to top