CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 53/166 (31.93%), Postives = 79/166 (47.59%), Query Frame = 3
Query:   12 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            +AG +    T+ +A   L  NP   +K+  E+      +         + L YL  V+KET+R+ P       R   Q C + G  IPA   +     A+  DPE W NPE F PERF       + + +  +PFGAG R C G+ +G+  + L L ++L KF +E
Sbjct:  340 IAGYEIVTNTLSFATYLLATNPECQEKLLEEVDCFSKEHLAPEYCSLQEGLPYLDMVIKETLRMYPPA-FRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNPENFNPERFTAEA-QQRRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKFRFE 503          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP6G1_DROME (Cytochrome P450 6g1 OS=Drosophila melanogaster GN=Cyp6g1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 55/170 (32.35%), Postives = 88/170 (51.76%), Query Frame = 3
Query:    9 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPR-ETIQ-------KCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKG-QHFELIPFGAGRRICPGLNMGIATVDLALANLL 491
            F AG +TS++T+ +A+  + K+P   K+++ EI   +    G ++ + +Q L YL  VV E +R+ P +P L    E+++       K   D Y +   T VF+  +A+  DP+ W NP +F PERF  S  + K        PFG+G   C G  +G+    L L +LL
Sbjct:  310 FTAGFETSSSTMSFALYEMAKHPEMQKRLRDEINEALVEGGGSLSYEKIQSLEYLAMVVDEVLRMYPVLPFLDREYESVEGQPDLSLKPFYD-YTLENGTPVFIPIYALHHDPKYWTNPSQFDPERF--SPANRKNIVAMAYQPFGSGPHNCIGSRIGLLQSKLGLVSLL 476          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 53/177 (29.94%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW------EMPLGIR 527
            AG +T+++ + + +  L  +P   +K+Q EI +++  NK     D V ++ YL  VV ET+R+ P + + + R   +   I+G  IP    V + ++A+  DP+ W  PE+F PERF     D     +   PFG+G R C G+   +  + LA+  +L  F +      ++PL +R
Sbjct:  305 AGYETTSSVLSFIIYELATHPDVQQKLQEEIDTVLP-NKAPPTYDTVLQMEYLDMVVNETLRIFP-IAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKNND-NIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQIPLKLR 478          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2CK_MACFA (Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP2C20 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            ++FVAG +T++ T+ + +  L+K+P    KVQ EI  +IG ++    +D    + Y  AV+ E  R    VP  +P           Y IP  T +     ++  D + + NP+ F P  F+D   +FK   +  +PF AG+RIC G  +    + L L  +L  F+
Sbjct:  293 DLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-SHMPYTDAVIHEIQRYIDLVPTGVPHAVTTDIKFRNYLIPKGTIIITLLTSVLHDDKEFPNPKIFDPGHFLDENGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFN 457          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2C5_RABIT (Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CYP2C5 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 47/166 (28.31%), Postives = 85/166 (51.20%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F AG +T++ T+ +++  L+K+P    +VQ EI  +IG ++    +D    + Y  AV+ E  R    +P  +P    +      Y IP  T +  +  ++  D +A+ NP+ F P  F+D   +FK   +  +PF AG+R+C G  +    + L L ++L  F
Sbjct:  290 DLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF 453          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2BB_CANFA (Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B11 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.555e-15
Identity = 52/174 (29.89%), Postives = 88/174 (50.57%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL--ANLLYKFDWEMPL 518
            ++F AG +T++ T+ +    ++K P   +++  EI  +IG ++   + DD  ++ Y  AV+ E  R    +P+ +P    +     GY IP  T VF    +   DP  +E P+ F P+ F+D+    K ++   IPF  G+RIC  L  GIA ++L L    +L  F    P+
Sbjct:  294 SLFFAGTETTSTTLRYGFLLMLKYPHIAERIYKEIDQVIGPHR-LPSLDDRAKMPYTDAVIHEIQRFGDLLPIGVPHMVTKDICFRGYIIPKGTEVFPILHSALNDPHYFEKPDVFNPDHFLDANGALK-KNEAFIPFSIGKRIC--LGEGIARMELFLFFTTILQNFSVASPM 463          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP6J1_BLAGE (Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6J1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   12 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            VAG  TS+ T+ +A+  L  +       + EI+ ++  +K  V    ++++ YL  VV ET+R  P +P L  R      +     +PA T V++  +A+  D + + +P +F PERF +        HF  +PFG G R C G+  G   V  AL ++L  F+
Sbjct:  304 VAGFHTSSMTLTFALYELSVHQDIQTTARTEIKDVLEHHKKKVTYYSIKDMKYLDMVVNETLRKYPAIPFLDRRCQEDYPLTQDLMLPAGTGVYIPVYALHHDSKYFPSPAKFDPERFSEKNKQ-NIPHFAYMPFGEGPRNCIGMRFGSMQVKAALIHILSNFE 466          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP51A_HUMAN (Lanosterol 14-alpha demethylase OS=Homo sapiens GN=CYP51A1 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL--LYKFD 503
            + +AG  TS+ T  W   +L ++    KK  LE +++ G N   +  D +++L+ L   +KET+RL+P + +++ R       + GY IP   +V V+     R  ++W    +F P+R++       G+ F  +PFGAGR  C G N     +    + +  LY+FD
Sbjct:  308 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD-NPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 473          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2F1_HUMAN (Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 54/173 (31.21%), Postives = 80/173 (46.24%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            N+   G  T + T+  A   LMK P+   +VQ EI  L+ G        D   + Y  AV+ E  R    +P+ +P    +     G+ IP  T V      +  DP  +  P+EF PE F+D+   FK +    +PF AGRR+C G ++    + L L  +L  F  + PLG
Sbjct:  294 NLLFGGTKTVSTTLHHAFLALMKYPKVQARVQEEI-DLVVGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMNLPHRVTRDTAFRGFLIPKGTDVITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSFSLQ-PLG 463          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2CV_CAPAE (Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus GN=CYP2C31 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDF-KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            +VF AG +T++ T+ + +  L+K+P    KVQ EI  ++G N+    +D    + Y  AV+ E  R    VP  +P    Q      Y IP  T +  +  ++  D + + NP +F P  F+D   +F K  HF  + F AG+R+C G  +    + L L ++L  F
Sbjct:   87 DVFSAGTETTSLTLRYGLLLLLKHPEVTAKVQEEIDRVVGRNRSPCMQDR-SRMPYTDAVLHEIQRYIDLVPSNLPHVATQDVKFREYLIPKGTAILTSLTSVLHDGKEFPNPGQFDPAHFLDESGNFKKTDHF--MAFSAGKRVCVGEGLARMELFLLLVSILQHF 250          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
THAS_BOVIN5.555e-1531.93Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]
CP6G1_DROME5.555e-1532.35Cytochrome P450 6g1 OS=Drosophila melanogaster GN=... [more]
CP3A8_MACFA5.555e-1529.94Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP2CK_MACFA5.555e-1529.94Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP... [more]
CP2C5_RABIT5.555e-1528.31Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2BB_CANFA5.555e-1529.89Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B1... [more]
CP6J1_BLAGE7.255e-1530.49Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6... [more]
CP51A_HUMAN7.255e-1529.17Lanosterol 14-alpha demethylase OS=Homo sapiens GN... [more]
CP2F1_HUMAN7.255e-1531.21Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1... [more]
CP2CV_CAPAE7.255e-1530.54Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
back to top