CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP51A_PONAB (Lanosterol 14-alpha demethylase OS=Pongo abelii GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL--LYKFD 503
            + +AG  TS+ T  W   +L ++    +K  LE +++ G N   +  D +++L+ L   +KET+RL+P + +++ R       + GY IP   +V V+     R  ++W    +F P+R++       G+ F  +PFGAGR  C G N     +    + +  LY+FD
Sbjct:  308 LLLAGQHTSSTTSAWMGFFLARDKTLQEKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD-NPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 473          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP51A_MACFA (Lanosterol 14-alpha demethylase OS=Macaca fascicularis GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL--LYKFD 503
            + +AG  TS+ T  W   +L ++    +K  LE +++ G N   +  D +++L+ L   +KET+RL+P + +++ R       + GY IP   +V V+     R  ++W    +F P+R++       G+ F  +PFGAGR  C G N     +    + +  LY+FD
Sbjct:  308 LLLAGQHTSSTTSAWMGFFLARDKTLQEKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD-NPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 473          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP51A_BOVIN (Lanosterol 14-alpha demethylase OS=Bos taurus GN=CYP51A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL--LYKFD 503
            + +AG  TS+ T  W   +L ++    +K  LE +++ G N   +  D +++L+ L   +KET+RL+P + + + R       + GY IP   +V V+     R  ++W    +F P+R+++      G+ F  +PFGAGR  C G N     +    + +  LY+FD
Sbjct:  307 LLLAGQHTSSTTSAWMGFFLARDKTLQEKCFLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MTMMRLAKTPLTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLEDS-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 472          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 43/162 (26.54%), Postives = 79/162 (48.77%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            G DT+A+ V W    L  +P   ++ + E++S++G     +  D + ++ Y    +KE +RL P VP ++   +      DG ++P   +V ++ + +  +P+ W NPE F P RF     D        +PF  G R C G    ++ + + +A  L +F+
Sbjct:  321 GHDTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSS-ITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAP---DSPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFE 478          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2E1_RAT (Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1 PE=1 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 51/167 (30.54%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 503
            ++F AG +T++ T+ + +  LMK P   +K+  EI  +IG ++     D + ++ Y+ AVV E  R    VP  +P E  +  V  GY IP  T V     ++  D   + +PE+F PE F++    FK   +    F AG+R+C G  +    + L L+ +L  F+
Sbjct:  295 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRVPAVRDRL-DMPYMDAVVHEIQRFINLVPSNLPHEATRDTVFQGYVIPKGTVVIPTLDSLLYDSHEFPDPEKFKPEHFLNENGKFKYSDY-FKAFSAGKRVCVGEGLARMELFLLLSAILQHFN 459          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 46/166 (27.71%), Postives = 83/166 (50.00%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F AG +T++ T+  ++  L+K+P    KVQ EI  +IG ++    +D    + Y  AV+ E  R    +P+ +P    +      Y IP    +  +  ++  D + + NP+ F P  F+D   +FK   +  +PF AG+R+C G  +    + L L ++L  F
Sbjct:  181 DLFGAGTETTSTTLSISLLLLLKHPEVAAKVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF 344          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2BA_MOUSE (Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 47/175 (26.86%), Postives = 85/175 (48.57%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPF---------GAGRRICPGLNMGIATVDLALANLLYKF 500
            ++F  G +TS+ T+ +    ++K P   +KVQ EI  +IG ++     DD  ++ Y  AV+ E  R    +P+ +P    +  +  GY +P  T V+    +   DP+ +E P+ F P++F+D+    K      +PF           G+RIC G ++  + + L   ++L  F
Sbjct:  294 SLFFVGTETSSTTLHYGFLLMLKYPHVTEKVQKEIDQVIGSHR-LPTLDDRTKMPYSDAVIHEIQRFSDLIPIGVPHRVTKDTLFRGYLLPKNTEVYPILSSALHDPQYFEQPDSFNPDQFLDANGALKKSE-AFLPFSTGQIFDQKSVGKRICLGESIARSELFLFFTSILQNF 466          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP11A_HORSE (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Equus caballus GN=CYP11A1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 53/169 (31.36%), Postives = 87/169 (51.48%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            +   G DT++ ++ W +  + +N R  + ++ E+ +     +G  +   VQ +  LKA +KET+RL P + + + R      VI  Y IPAKT V V+ + +G+DP  + NP  F P R++D   D    HF  + FG G R C G  +    + L L ++L  F  E+
Sbjct:  322 MLAGGVDTTSMSLQWHLYEIARNLRVQEMLREEVLAARRQAQGDTSTM-VQMVPLLKASIKETLRLHP-IAVTLQRYPQNDLVIRDYMIPAKTLVQVSIYTMGQDPTFFSNPRRFDPTRWLDKNKDL--THFRNLGFGWGVRQCLGRRIAELEMTLFLIHILENFRVEI 486          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C85A2_ARATH (Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CYP85A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 48/170 (28.24%), Postives = 91/170 (53.53%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF--VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            +  +G +T + T + A+ YL  +P+A+++++ E  ++    +    +  DD++ + + +AV+ ET RL   V  ++ R+T     ++GY IP   R++V    I  D   +E+P  F P R+++  ++ K      + FG G R+CPG  +GI+ V   L   + K+ WE
Sbjct:  274 ILYSGYETVSTTSMMALKYLHDHPKALEELRREHLAIRERKRPDEPLTLDDIKSMKFTRAVIFETSRLATIVNGVL-RKTTHDLELNGYLIPKGWRIYVYTREINYDTSLYEDPMIFNPWRWMEKSLESKSY---FLLFGGGVRLCPGKELGISEVSSFLHYFVTKYRWE 439          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C6A23_DROME (Probable cytochrome P450 6a23 OS=Drosophila melanogaster GN=Cyp6a23 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 3
Query:    9 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVID-GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL--YKF 500
            FVAG +TS+ T+ +A+  L  +     +++ EI +++  +      + ++E+ YL+ VV ET+R  P +  L           D  Y I   T V + A  I  DPE +  PE+F PERF D  I  +      +PFG G R C GL  G+    + LA L+  YKF
Sbjct:  303 FVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFKPERFTDEAIAAR-PSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKF 468          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP51A_PONAB2.111e-1428.57Lanosterol 14-alpha demethylase OS=Pongo abelii GN... [more]
CP51A_MACFA2.111e-1428.57Lanosterol 14-alpha demethylase OS=Macaca fascicul... [more]
CP51A_BOVIN2.111e-1428.57Lanosterol 14-alpha demethylase OS=Bos taurus GN=C... [more]
CP4AA_RAT2.111e-1426.54Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP2E1_RAT2.111e-1430.54Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1... [more]
CP2CF_RABIT2.111e-1427.71Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP2BA_MOUSE2.111e-1426.86Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE... [more]
CP11A_HORSE2.111e-1431.36Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C85A2_ARATH2.111e-1428.24Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CY... [more]
C6A23_DROME2.111e-1432.93Probable cytochrome P450 6a23 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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