CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2C1_RABIT (Cytochrome P450 2C1 OS=Oryctolagus cuniculus GN=CYP2C1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 49/166 (29.52%), Postives = 82/166 (49.40%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            +VF AG +T++ T+ + +  LMK+P  + KVQ EI  +IG ++    +D    + Y  A V E  R    +P  +PR T        Y IP  T V  +  ++  + + + NP+ F P  F+D+   F+   +  +PF  G+R+C G  +    + L L  +L  F
Sbjct:  293 DVFGAGTETTSTTLRYGLLLLMKHPEVIAKVQEEIERVIGRHRSPCMQDR-SRMPYTDATVHEIQRYINLIPNNVPRATTCNVKFRSYLIPKGTAVITSLTSMLYNDKEFPNPDRFDPGHFLDASGKFRKSDY-FMPFSTGKRVCVGEVLARMELFLFLTAILQNF 456          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP11A_MESAU (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Mesocricetus auratus GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 50/169 (29.59%), Postives = 88/169 (52.07%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            +   G DT++ T+ W++  +  N +  + ++ E+ +     +G + +  VQ +  LKA +KET+RL P + + + R  +   V+  Y IPAK  V V  +A+GR+P  + NP +F P R+++        HF  + FG G R C G  +    + + L N+L  F  E+
Sbjct:  319 MLAGGVDTTSMTLQWSLYEMAHNLKVQEMLRAEVLAARRQAQGDMVKM-VQLVPLLKASIKETLRLHP-ISVTVQRYLVDDLVLRNYRIPAKMLVQVANYAMGREPSFFPNPNKFDPTRWLEK--SKNTTHFRYLSFGWGVRQCLGRRIAELEMTIFLINVLENFRIEL 483          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C85A1_ORYSJ (Cytochrome P450 85A1 OS=Oryza sativa subsp. japonica GN=CYP85A1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 47/167 (28.14%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   15 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN--KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            +G +T + T + A+ YL  +P+A+++++ E   +  G   +  ++ +D + + + +AV+ ET+RL   V  L+ R+T Q   ++GY IP   R++V    I  DP  + +P  F P R+++  ++    H   + FG G R+CPG  +G   +   L   + ++ WE
Sbjct:  281 SGYETMSTTSMMAVKYLSDHPKALEQLRKEHFDIRKGKAPEDAIDWNDFKSMTFTRAVIFETLRLATVVNGLL-RKTTQDVEMNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLEKNME---SHPHFMLFGGGSRMCPGKEVGTVEIATFLHYFVTQYRWE 443          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C6A22_DROME (Cytochrome P450 6a22 OS=Drosophila melanogaster GN=Cyp6a22 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 52/170 (30.59%), Postives = 81/170 (47.65%), Query Frame = 3
Query:    9 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL--IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            F AG DTSA+T+ +A+  L K P    K++ EI   +  + G    D +QEL Y++ V+ ET+R  P +P L  I R          + I     + +  + I  DP  +  P +F PERF+   +  +      +PFG G R C G+  G     + L +LL  F + +
Sbjct:  296 FAAGFDTSASTLGFALYELAKQPALQAKLREEIDQALRLHNGEFTYDSMQELRYMELVIAETLRKYPILPQLTRISRHLYAAKGDRHFYIEPGQMLLIPVYGIHHDPALYPEPHKFIPERFLADQL-AQRPTAAWLPFGDGPRNCIGMRFGKMQTTIGLVSLLRNFHFSV 464          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C12A2_MUSDO (Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP12A2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 50/180 (27.78%), Postives = 87/180 (48.33%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFK-----------GQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            ++ +AG DT+++T    +  L KNP   KK++ EI  L+       NE   + + YL+A +KE++R+ P + +   R      VI GY +P  T + +N+  + +D   +    EF PER++ +  + +              F  +PFG G R C G  +    ++L +A L+  F  E
Sbjct:  329 DMLMAGVDTTSSTFTGLLLCLAKNPEKQKKLREEIMQLLPQKDSEFNEAVFKNMPYLRACIKESLRVYP-LTVGNARTQANDVVISGYRVPKGTLISMNSVTLIKDDAHYPRASEFLPERWLRASKENEKSAECPHALKASSPFVYLPFGFGSRSCIGRRIAEMELELGIARLIRNFHVE 507          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP4P1_DROME (Cytochrome P450 4p1 OS=Drosophila melanogaster GN=Cyp4p1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 45/162 (27.78%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   18 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI-DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 500
            G DT++  +++ +  +  NP   +    EI+  I  +   ++   + +L YL+  +KET RL P+VP++  RE +Q+  + +G  +P   ++ ++ + I R+ + W++PEEF PERF+   +  +   +  +PF AG+R C G    +  +   +  LL +F
Sbjct:  321 GYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSNLDVGQLNKLKYLEYFMKETTRLFPSVPIM-GREAVQETELANGLILPKGAQITIHVFDIHRNAKYWDSPEEFRPERFLPENVQDR-HTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQF 480          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP2W1_HUMAN (Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            ++ +AG +T++AT+ WA   + ++P    +VQ E+  ++G  +    ED  Q L Y  AV+ E  R    +P  +PR T     + G+ +P  T V     ++  D   W+ P +F P  F+D+   F  +    +PF AGRR+C G  +    + L  A LL ++    P G+
Sbjct:  292 DMVMAGTETTSATLQWAALLMGRHPDVQGRVQEELDRVLGPGRTPRLEDQ-QALPYTSAVLHEVQRFITLLPH-VPRCTAADTQLGGFLLPKGTPVIPLLTSVLLDETQWQTPGQFNPGHFLDANGHFVKRE-AFLPFSAGRRVCVGERLARTELFLLFAGLLQRYRLLPPPGV 462          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CCD1D_DROME (Probable cytochrome P450 12d1 distal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-d PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 45/172 (26.16%), Postives = 88/172 (51.16%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI---DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 509
            ++  AG D +A  +   +  L K+P    K++ E+ S++      +NE++++++ YL+AV+KET+R  P       R      ++ GY +P  T V + +  + ++   +  P+EF PER++   ++    +   F  +PFG G R+C G  +    ++  +A L+  F  E
Sbjct:  321 DILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPN-GFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVE 491          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C6A17_DROME (Probable cytochrome P450 6a17 OS=Drosophila melanogaster GN=Cyp6a17 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 3
Query:    9 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVID-GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL--YKF 500
            FVAG +TS+ T+ +A+  L +N     K++ EI ++ G +      + ++E+ YL+ VV ET+R  P +  L           D  Y I   T V + A  I  DP+ +  PE F PERF D  I  +      +PFG G R C GL  G+    + LA L+  YKF
Sbjct:  302 FVAGFETSSTTMGFALYELARNQDVQDKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTDTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEPEIFKPERFTDEEIAAR-PSCTWLPFGEGPRNCIGLRFGMMQTCVGLAYLIRGYKF 467          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: CP6V1_DROME (Probable cytochrome P450 6v1 OS=Drosophila melanogaster GN=Cyp6v1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.703e-14
Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 3
Query:   12 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN-KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTR--------VFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 497
            VAG +T +A++ +A+  L K P    +++ EIR     N  G +  + V  + +L  VV+ET+R  P VPLL  RE         Y++             VF++  AI  DP+ W +P+ F PERF  +    +      +PFGAG R C G+ +G+  + L L   L++
Sbjct:  317 VAGIETCSASMSFALYELAKQPLMQSRLRREIREAFASNPNGRLTYEAVARMEFLDMVVEETLRKYPIVPLL-ERECTPINKKRFYSLRPHAECYTRRGMPVFISNLAIHHDPKYWPDPDRFDPERFSAANKALQAP-MSYMPFGAGPRNCIGMQIGLLQIKLGLVYFLHQ 485          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2C1_RABIT2.757e-1429.52Cytochrome P450 2C1 OS=Oryctolagus cuniculus GN=CY... [more]
CP11A_MESAU2.757e-1429.59Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C85A1_ORYSJ2.757e-1428.14Cytochrome P450 85A1 OS=Oryza sativa subsp. japoni... [more]
C6A22_DROME2.757e-1430.59Cytochrome P450 6a22 OS=Drosophila melanogaster GN... [more]
C12A2_MUSDO2.757e-1427.78Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP1... [more]
CP4P1_DROME3.601e-1427.78Cytochrome P450 4p1 OS=Drosophila melanogaster GN=... [more]
CP2W1_HUMAN3.601e-1429.31Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2... [more]
CCD1D_DROME3.601e-1426.16Probable cytochrome P450 12d1 distal, mitochondria... [more]
C6A17_DROME3.601e-1434.13Probable cytochrome P450 6a17 OS=Drosophila melano... [more]
CP6V1_DROME4.703e-1431.58Probable cytochrome P450 6v1 OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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