CX294010

Overview
NameCX294010
Unique NameCX294010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig776 contig Ccv1_Contig776:353..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.944e-45
Identity = 82/172 (47.67%), Postives = 125/172 (72.67%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            +VFV G+DTS   + WAMT L+++P+++ ++Q E+R++  G K  V+EDD+Q + YLKAV+KE +RL P  P++ P E+ +   +  Y IPA T+V +NAWAIGR+   W  + EEF PER +D+ +DF+GQ+FEL+PFGAGRRICP ++  +   ++ LANL++ FDW++P
Sbjct:  287 DVFVGGSDTSFTLLEWAMTELLRHPKSLNRLQEEVRTICKG-KSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLP 457          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.148e-44
Identity = 84/173 (48.55%), Postives = 114/173 (65.90%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            +F AG +TSA+T+ WAMT L KNP+   K++ EI++++G     V E D   L YL+A VKET+RL P  PLL+PR  ++ C I  Y IP   ++ VNAW IGRDP+ W +P  F PERF++S +DF+G  F LIPFGAGRRICPGL +    + L +A  +   DW +P G+
Sbjct:  288 LFGAGTETSASTIEWAMTELTKNPKITAKIRSEIQTVVGERS--VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGM 458          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.148e-44
Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFID---SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            N+F AG DTS++ + WA+  L+KNP  +K+ Q E+  +IG ++ F+ E D+ +L YL+A+ KE  R  P+ PL +PR   Q C ++G+ IP  TR+ VN WAIGRDP  WENP EF P+RF++   + ID +G  FELIPFGAGRRIC G  +GI  V+  L  L++ FDWE+P  +
Sbjct:  301 NMFTAGTDTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFL-EADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSV 476          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.339e-44
Identity = 83/180 (46.11%), Postives = 120/180 (66.67%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFID----SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIRA 530
            ++F AG DTS  T+ +AMT L++ P  MKK+Q E+R  +   +  V ED++  +  LKAV+KET+RL P VPLL+P  ++  C + GY IPA TRV VNAWA+GR    WE   EF PERF+       +D K   F+ + FG+GRR+CPG++   AT++  L+NL+Y+FDW++P G++A
Sbjct:  333 DMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKA 512          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.361e-44
Identity = 86/176 (48.86%), Postives = 121/176 (68.75%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFID---SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            ++FVAG DTSAAT+ WAM  L+ NP  ++K + EI +++G N   + E D+  L YL+A+V+ET+R+ P  PL++ RE+ +  V+ GY IPAKTR+FVN WAIGRDP  WENP EF PERF +   S +D +GQH+  IPFG+GRR CPG ++ +  V + LA ++  F W+   G
Sbjct:  295 DIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVG-NSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIV-RESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNG 468          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.361e-44
Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE-NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            ++F+AG +T+ A + W MT L+++P  MKK+Q EIR+       +++E+DV+++ YLKAVVKE +RL P +PLL+PRE  +   + GY I A T+V +NAWAI RD   W  + EEF PER +DS +DF+G +FE IPFG+GRRICPG+   +A V++ LANL+ +F+W M
Sbjct:  295 DMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRM 465          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.695e-44
Identity = 84/177 (47.46%), Postives = 121/177 (68.36%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDS----CIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 521
            N+FVAG DTS++TV WA+  L++NP+ + + Q EI  ++G ++  V E D+ +L YL+A+VKET RL P+ PL +PR   + C I+GY IP  + + +N WAI RDP AW +P EF PERF+       +D +G  FE+IPFGAGRRIC G+N+GI  V L +A L++ F+W++  G
Sbjct:  300 NLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDR-LVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSG 475          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.695e-44
Identity = 83/173 (47.98%), Postives = 114/173 (65.90%), Query Frame = 3
Query:    6 VFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 524
            +F AG +TSA+T+ WAMT L KNP+   K++ E+++++G     V E D   L YL+A VKET+RL P  PLL+PR  ++ C I  Y IP   ++ VNAW IGRDP+ W +P  F PERF++S +DF+G  F LIPFGAGRRICPGL +    + L +A  +   DW +P G+
Sbjct:  289 LFGAGTETSASTIEWAMTELTKNPKITAKLRSELQTVVGERS--VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGM 459          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.269e-43
Identity = 84/179 (46.93%), Postives = 116/179 (64.80%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKG----FVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDS----CIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 515
            ++F AG +TS  T+ + M  L+ N   M+K+Q E+R+ +G   G     + E+D+  + YLKA +KET+RL P  P L+P  +     IDGY +PA TRV V+AWA+GRD   WE PEEF PERF+       +  KG+    IPFG+GRRICPG+N G AT+++ LANL+Y FDWE+P
Sbjct:  328 DMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVP 506          
BLAST of CX294010 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.657e-43
Identity = 83/173 (47.98%), Postives = 121/173 (69.94%), Query Frame = 3
Query:    3 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFID---SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 512
            ++ +AG DTSA T+ WAM  L+ NP  ++K + E+ +++G ++  V E D+  L YL+ +V+ET+RL P  PLL  RE+ ++ V+ GY IPAKTR+FVN WAIGRDP  WENP EF PERF++   S +D +GQH+ L+PFG+GRR CPG ++ +  V + LA L+  F W++
Sbjct:  303 DILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSR-IVEESDIANLPYLQGIVRETLRLHPAGPLLF-RESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV 473          
The following BLAST results are available for this feature:
BLAST of CX294010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C71AP_ARATH3.944e-4547.67Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA1.148e-4448.55(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C75A5_EUSGR1.148e-4448.02Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71C4_MAIZE3.339e-4446.11Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C93A2_SOYBN4.361e-4448.86Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AE_ARATH4.361e-4449.12Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY5.695e-4447.46Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C80B2_ESCCA5.695e-4447.98(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71C2_MAIZE1.269e-4346.93Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C93A3_SOYBN1.657e-4347.98Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05004G05SK FlavRip1 Citrus clementina cDNA clone C05004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294010 ID=CX294010; Name=CX294010; organism=Citrus clementina; type=EST; length=535bp
TGAACGTATTCGTTGCTGGAGCAGACACGAGTGCAGCAACTGTGGTTTGG
GCCATGACTTACTTAATGAAGAATCCTAGAGCAATGAAAAAAGTTCAACT
GGAAATCAGATCGTTGATTGGGGGCAACAAAGGCTTTGTAAATGAAGATG
ATGTTCAAGAACTACATTATCTTAAGGCGGTAGTGAAGGAGACAATGAGA
TTGCAACCCACGGTGCCGTTACTAATCCCAAGAGAAACAATTCAAAAGTG
CGTAATAGATGGGTATGCAATACCAGCTAAAACACGTGTCTTTGTAAATG
CATGGGCGATAGGAAGAGACCCTGAAGCTTGGGAGAATCCGGAGGAATTT
TATCCGGAGAGATTCATTGATAGCTGTATTGACTTTAAAGGGCAGCACTT
TGAATTAATACCGTTTGGTGCTGGCAGAAGAATTTGTCCTGGGTTGAATA
TGGGAATCGCAACTGTGGATCTTGCACTTGCTAATCTTCTTTACAAATTT
GATTGGGAAATGCCGCTTGGAATAAGAGCCATGAC
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