CX294030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.223e-22 Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 I+W+NL+P P + L AI+ F S E + +SA + GSGW WLG + + K+L++ +NQ+PL LVPL IDVWEHAYYLQ KN Y++ W++ NWK SD Y Sbjct: 94 IYWQNLSPTKS----EPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGYNKKXKKLQILAVSNQEPLQA-VTGLVPLFAIDVWEHAYYLQXKNXXAKYVEAXWDIANWKBISDRY 210
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCLP (Superoxide dismutase [Mn] OS=Mycobacterium lepraemurium GN=sodA PE=3 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 4.209e-22 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 ++WKNL+P GG+ P L AID FGS + + SA L GSGW LG DT RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 78 LWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.209e-22 Identity = 54/122 (44.26%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 I+WKNL+P GG+ P L AID FGS + + +A L GSGW LG D+ RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW+ + Y Sbjct: 78 IWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWEDVQNRY 194
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRP3 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M3 GN=sodA PE=3 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22 Identity = 50/123 (40.65%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L+P + S + AID FGS +A ++ +A GSGW WL ++ E +LE+ +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 83 LFWELLSPEKQD----VTSDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22 Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 83 LFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22 Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 83 LFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_NOCAS (Superoxide dismutase [Mn] OS=Nocardia asteroides GN=sodA PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 372 I+WKNL+P GG+ P L AID FGS + + +A L GSGW LG DT ++L +Q V ++PLL +D+WEHA+YLQYKNVK DY+ WNV+NW D + K Sbjct: 78 IWWKNLSP---NGGDKPVGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVTAFWNVVNWADVQDRFGK 196
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ + P P + L AID FGS E +A GSGW WL ++ E K LEV +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 83 LFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ + P P + L AID FGS E +A GSGW WL ++ E K LEV +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 83 LFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 I+WKNL+P GG+ P L ID FGS + + SA L GSGW LG DT +L +Q V+ ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 78 IWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187 The following BLAST results are available for this feature:
BLAST of CX294030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294030 ID=CX294030; Name=CX294030; organism=Citrus clementina; type=EST; length=570bpback to top |