CX294038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.075e-22 Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDV +VS+KGS++GWQAMS NWG NWQ+ + L+GQ LSF+VTASDGRTVTS+NV P+ W Sbjct: 174 NVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.710e-22 Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGG G + SVSIKGS+TGW AMSRNWG NWQSN+YL+GQSLSF+VT+SDG+T+T +V PA W Sbjct: 185 NVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.294e-21 Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAG + SVSIKGSKTGW AMSRNWG NWQSN+YL+GQ+LSF +T +DG T NVVP++W Sbjct: 177 NVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSW 240
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.139e-20 Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAGD++ VS+KGSKT W MSRNWGQNWQSN+ L GQSLSF+VTASD R+ TS NV PA W Sbjct: 186 NVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.139e-20 Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAGD+ S+KGSKTGW +++RNWGQNWQSN+ L GQSLSF+VT+SD RT TS N+ P+NW Sbjct: 184 NVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.537e-20 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLSF+V SDGR+ TSNN+ P+NW Sbjct: 182 NVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.537e-20 Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAGD+ S+KGS+TGW ++SRNWGQNWQSN+ L GQ+LSF+VT SD RT TS N+VP+NW Sbjct: 181 NVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNW 244
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.313e-20 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGG+G V VSIKGSKT W AMSRNWGQNWQSN+YLN QSLSF+V D R VT N+ P+NW Sbjct: 173 NVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.327e-20 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGG+G V +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF V DGR VT+ NV P+NW Sbjct: 179 NVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.651e-20 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN+YL+G++LSF+VTA DGR++T +V PA W Sbjct: 179 NVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248 The following BLAST results are available for this feature:
BLAST of CX294038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294038 ID=CX294038; Name=CX294038; organism=Citrus clementina; type=EST; length=530bpback to top |