CX294038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.639e-20 Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDVH+V++K ++ WQA+SRNWGQNWQS + L+GQ+LSF+VT DGR+V SNN VP W Sbjct: 215 NVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.805e-19 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L GQ+LSF+VT SD RT TS N PA W Sbjct: 188 NVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.160e-19 Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIK---GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDVH+V++K G K WQAM+RNWGQNWQS + L+GQ+LSF VT D R+V S NV PA W Sbjct: 186 NVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGW 252
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.160e-19 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGG G + SV IKG+KTGW MSRNWG NWQ+N+YLN Q++SF VT++ G+T+ +V P+NW Sbjct: 174 NVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.066e-18 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF+VT+SD R+ TS N+ PANW Sbjct: 181 NVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.392e-18 Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGG+G V + IKGS TGW AMSRNWG NWQSN+ L+GQ+LSF+V A DGR VT+ +V PA W Sbjct: 175 NVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18 Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ LSF++T+SDG+T+T+ NVVP W Sbjct: 181 NVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.908e-18 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF+VT+SD TVTS NV P NW Sbjct: 189 NVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.010e-17 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+LSF+V A DG VT+ +V PANW Sbjct: 177 NVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.848e-17 Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF+VT SDG T NNV+P NW Sbjct: 201 NVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264 The following BLAST results are available for this feature:
BLAST of CX294038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294038 ID=CX294038; Name=CX294038; organism=Citrus clementina; type=EST; length=530bpback to top |